RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 ZCCHC23Q6ZST2 131 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 SEM1Q6ZVN7 128 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 ZNF551Q7Z340 670 aaPredicted RBP12.13□□□□□ -0.47
SDF4-203ENST00000403997 WDR53Q7Z5U6 358 aaPredicted RBP12.13□□□□□ -0.47
SDF4-203ENST00000403997 PLCZ1Q86YW0 608 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 OR2L13Q8N349 312 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 WDSUB1Q8N9V3 476 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 ACBD4Q8NC06 268 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 OR14L1PQ8NHC6 308 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 AGR3Q8TD06 166 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 TWIST2Q8WVJ9 160 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 PPCDCQ96CD2 204 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 WDYHV1Q96HA8 205 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 CCT7Q99832 543 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 UGT2B28Q9BY64 529 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 REEP4Q9H6H4 257 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 SH3BP4Q9P0V3 963 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 MED12Q93074 2177 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 HSPB2A8KAH6 182 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 TMEM233B4DJY2 109 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 PIP5K1BO14986 540 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 LSM1O15116 133 aaKnown RBP12.12□□□□□ -0.47
SDF4-203ENST00000403997 PDPK1O15530 556 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 ACTL6AO96019 429 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 CREB1P16220 341 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 IGFBP2P18065 325 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 SDC1P18827 310 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 MSX1P28360 303 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 GPC1P35052 558 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 WNT3P56703 355 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 HSPB3Q12988 150 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 GAB1Q13480 694 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 ZNHIT3Q15649 155 aaPredicted RBP12.12□□□□□ -0.47
SDF4-203ENST00000403997 HSPB2Q16082 182 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 SLC25A35Q3KQZ1 300 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 UGT3A2Q3SY77 523 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 CYP27C1Q4G0S4 372 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 NHSL2Q5HYW2 709 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 TNIP2Q8NFZ5 429 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 CLHC1Q8NHS4 586 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 CIDECQ96AQ7 238 aaPredicted RBP12.12□□□□□ -0.47
SDF4-203ENST00000403997 DTNBP1Q96EV8 351 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 C14orf79Q96F83 325 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 FCRL1Q96LA6 429 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 LURAP1Q96LR2 239 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 TRIB1Q96RU8 372 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 TREX2Q9BQ50 279 aaPredicted RBP12.12□□□□□ -0.47
SDF4-203ENST00000403997 TMEM109Q9BVC6 243 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 PARD6BQ9BYG5 372 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 PRDM14Q9GZV8 571 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 Q9N2J8 555 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 TAS2R10Q9NYW0 307 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 FBXL2Q9UKC9 423 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 CBLCQ9ULV8 474 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 TMED5Q9Y3A6 229 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 WIF1Q9Y5W5 379 aa12.12□□□□□ -0.47
SDF4-203ENST00000403997 KDM4EB2RXH2 506 aaPredicted RBP12.11□□□□□ -0.47
SDF4-203ENST00000403997 ZNF500O60304 480 aaPredicted RBP12.11□□□□□ -0.47
SDF4-203ENST00000403997 IL2RAP01589 272 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 BPGMP07738 259 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 BCKDHAP12694 445 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 CYP4B1P13584 511 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 GRK2P25098 689 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 GABRA3P34903 492 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 TIMP3P35625 211 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 PRKAG1P54619 331 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 MANFP55145 182 aaKnown RBP12.11□□□□□ -0.47
SDF4-203ENST00000403997 TLE4Q04727 773 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 SRYQ05066 204 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 RCAN2Q14206 197 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 DECR1Q16698 335 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 KRT71Q3SY84 523 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 ZNF385BQ569K4 471 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 DCST1Q5T197 706 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 NSUN5P2Q63ZY6 315 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 ENPP6Q6UWR7 440 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 LACC1Q8IV20 430 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 TRIM42Q8IWZ5 723 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 DMRTC2Q8IXT2 367 aaPredicted RBP12.11□□□□□ -0.47
SDF4-203ENST00000403997 ZFP28Q8NHY6 868 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 ZBED6CLQ96FA7 236 aaPredicted RBP12.11□□□□□ -0.47
SDF4-203ENST00000403997 OR2B2Q9GZK3 357 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 EQTNQ9NQ60 294 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 DKKL1Q9UK85 242 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 MRTO4Q9UKD2 239 aaKnown RBP12.11□□□□□ -0.47
SDF4-203ENST00000403997 APCP25054 2843 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 HCFC1P51610 2035 aa12.11□□□□□ -0.47
SDF4-203ENST00000403997 RGS16O15492 202 aaPredicted RBP12.1□□□□□ -0.47
SDF4-203ENST00000403997 CTIFO43310 598 aaKnown RBP12.1□□□□□ -0.47
SDF4-203ENST00000403997 SCO2O43819 266 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 TBX19O60806 448 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 PEX11AO75192 247 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 PSMG1O95456 288 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 PRPS2P11908 318 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 CPN1P15169 458 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 BMP5P22003 454 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 TCEA1P23193 301 aaKnown RBP12.1□□□□□ -0.47
SDF4-203ENST00000403997 SRD5A2P31213 254 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 CEACAM8P31997 349 aaPredicted RBP12.1□□□□□ -0.47
SDF4-203ENST00000403997 EVI2BP34910 448 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms