RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 SKAP2O75563 359 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 LYPLA1O75608 230 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 REM1O75628 298 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 TRAPPC6AO75865 159 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 CLDN14O95500 239 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 CT45A8P0DMV1 189 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 CT45A9P0DMV2 189 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 SDC1P18827 310 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 DRD5P21918 477 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 TCEA1P23193 301 aaKnown RBP5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 PRPH2P23942 346 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 NTSP30990 170 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 MPIP34949 423 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 PTGDSP41222 190 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 KIR3DL1P43629 444 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 PPICP45877 212 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 TMED10P49755 219 aaKnown RBP5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 WNT3P56703 355 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 PMPCAQ10713 525 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 TOMM20Q15388 145 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 CEBPEQ15744 281 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 ZNF630Q2M218 657 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 UGT3A2Q3SY77 523 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 RFTN2Q52LD8 501 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 EIPR1Q53HC9 387 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 CT45A2Q5DJT8 189 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 NKAPLQ5M9Q1 402 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 WIPI1Q5MNZ9 446 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 SH2D4BQ5SQS7 431 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 TMEM198Q66K66 360 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 RTL6Q6ICC9 239 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 XKRXQ6PP77 449 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 PAOXQ6QHF9 649 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 ANGPTL8Q6UXH0 198 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 ZNF551Q7Z340 670 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 YRDCQ86U90 279 aaKnown RBP5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 SLC44A2Q8IWA5 706 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 CLYBLQ8N0X4 340 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 SLC34A3Q8N130 599 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 MREGQ8N565 214 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 C17orf47Q8NEP4 570 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 OR4N2Q8NGD1 307 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 FBXO30Q8TB52 745 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 PHF10Q8WUB8 498 aaKnown RBP5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 NUDT8Q8WV74 236 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 CIDECQ96AQ7 238 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 EFHD2Q96C19 240 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 HSPBAP1Q96EW2 488 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 C3orf30Q96M34 536 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 VSTM2LQ96N03 204 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 AMDHD1Q96NU7 426 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 GNRHR2Q96P88 292 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 ZIM3Q96PE6 472 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 BTBD9Q96Q07 612 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 ADOQ96SZ5 270 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 TRMOQ9BU70 441 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 C1orf50Q9BV19 199 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 TMEM109Q9BVC6 243 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 OSBPL11Q9BXB4 747 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 ANGPTL4Q9BY76 406 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 UCK2Q9BZX2 261 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 TP63Q9H3D4 680 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 GLIPR2Q9H4G4 154 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 METTL7AQ9H8H3 244 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 SERHLQ9NQF3 203 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 KLRF1Q9NZS2 232 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 FLRT3Q9NZU0 649 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 PRODH2Q9UF12 536 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 ZDHHC2Q9UIJ5 367 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 MAPRE3Q9UPY8 281 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 RNF6Q9Y252 685 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 CFL2Q9Y281 166 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 GPR55Q9Y2T6 319 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 C15orf41Q9Y2V0 281 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 SLC6A5Q9Y345 797 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 KLF2Q9Y5W3 355 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 KIAA1549Q9HCM3 1950 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 CSMD1Q96PZ7 3565 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 PDZD2O15018 2839 aa5.27□□□□□ -1.57
HMGB1P20-201ENST00000402555 PCNX3Q9H6A9 2034 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 MAP1AP78559 2803 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 C15orf38-AP3S2A0A0A6YYH1 394 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 GXYLT2A0PJZ3 443 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 OR14I1A6ND48 311 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 PRAMEF25A6NGN4 478 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 B4DXG7 233 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 NPIPB8E9PQR5 432 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 FAM229AH3BQW9 127 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 UPK1AO00322 258 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 BCKDKO14874 412 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 LSM1O15116 133 aaKnown RBP5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 TO15178 435 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 PDPK1O15530 556 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 CTIFO43310 598 aaKnown RBP5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 HNRNPRO43390 633 aaKnown RBP5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 ITM2AO43736 263 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 SCO2O43819 266 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 SUSD5O60279 629 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 PLOD3O60568 738 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 TSPAN2O60636 221 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms