RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 IFNGR2P38484 337 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 MRPL28Q13084 256 aaKnown RBP11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 P2RY14Q15391 338 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 ZNF542PQ5EBM4 170 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 BHLHB9Q6PI77 547 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 IKBIPQ70UQ0 350 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 PROKR2Q8NFJ6 384 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 OR52E1Q8NGJ3 308 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 TM9SF4Q92544 642 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 CNRIP1Q96F85 164 aaPredicted RBP11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 TRIM45Q9H8W5 580 aaPredicted RBP11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 SPINT1O43278 529 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 BMPR1AP36894 532 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 GCGRP47871 477 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 PCDH1Q08174 1060 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 LCN1P1Q5VSP4 162 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 CDC73Q6P1J9 531 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 TMEM255BQ8WV15 326 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 SPRYD4Q8WW59 207 aaPredicted RBP11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 VWCEQ96DN2 955 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 FRMD6Q96NE9 622 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 TNFRSF10DQ9UBN6 386 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 WDR45Q9Y484 360 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 ZNF670-ZNF695F2Z2N8 137 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 DVL2O14641 736 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 LILRB5O75023 590 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 TIMP1P01033 207 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 BMP7P18075 431 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 HTR3AP46098 478 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 RHAGQ02094 409 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 FAM27D1Q5T7N8 215 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 SLC36A4Q6YBV0 504 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 CDS1Q92903 461 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 OR7D2Q96RA2 312 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 IFT27Q9BW83 186 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 PRSS16Q9NQE7 514 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 STARD5Q9NSY2 213 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 NOTCH4Q99466 2003 aa11.9□□□□□ -0.5
PPP4R1-202ENST00000400555 PLXND1Q9Y4D7 1925 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 LRIT2A6NDA9 550 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 J3QLW9 94 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 ARHGEF9O43307 516 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 LDB3O75112 727 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 CDC123O75794 336 aaPredicted RBP11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 RASGRP1O95267 797 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 PAPLNO95428 1278 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 TBX6O95947 436 aaPredicted RBP11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 ZNF19P17023 458 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 TRIM23P36406 574 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 FABP5Q01469 135 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 PRDX1Q06830 199 aaKnown RBP11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 ENPP7Q6UWV6 458 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 TIGD4Q8IY51 512 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 SPPL3Q8TCT6 385 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 FGF13Q92913 245 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 TSACCQ96A04 125 aaPredicted RBP11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 RAD9AQ99638 391 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 SDHCQ99643 169 aaPredicted RBP11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 USP36Q9P275 1121 aaKnown RBP11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 A0A1W2PQU0 124 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 KAT7O95251 611 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 CISD3P0C7P0 127 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 HIST1H1TP22492 207 aaPredicted RBP11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 ACTR1BP42025 376 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 RAB28P51157 221 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 HMGA2P52926 109 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 ACTR1AP61163 376 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 PSPHP78330 225 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 ZSWIM7Q19AV6 140 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 UBE3DQ7Z6J8 389 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 SYT9Q86SS6 491 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 WFIKKN2Q8TEU8 576 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 A4GALTQ9NPC4 353 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 SLC7A7Q9UM01 511 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 ARID1AO14497 2285 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 LAMP2P13473 410 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 PVRP15151 417 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 POLR2CP19387 275 aaPredicted RBP11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 PDX1P52945 283 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 PDGFRLQ15198 375 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 IRF4Q15306 451 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 ZNF770Q6IQ21 691 aaPredicted RBP11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 PARGQ86W56 976 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 CADM2Q8N3J6 435 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 OR8D4Q8NGM9 314 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 TMEM106CQ9BVX2 250 aa11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 NDRG2Q9UN36 371 aaKnown RBP11.89□□□□□ -0.51
PPP4R1-202ENST00000400555 SERTM1A2A2V5 107 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 HYKKA2RU49 373 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 PSMD9O00233 223 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 EPHA5P54756 1037 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 ST3GAL3Q11203 375 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 TRAM2Q15035 370 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 ENTPD8Q5MY95 495 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 TANGO2Q6ICL3 276 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 CCDC80Q76M96 950 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 ATP13A2Q9NQ11 1180 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 LHX9Q9NQ69 397 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 WSB2Q9NYS7 404 aaPredicted RBP11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 ZNF222Q9UK12 451 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms