RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 SEC14L5O43304 696 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 PPP1R3DO95685 299 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 BMXP51813 675 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 CDK5R2Q13319 367 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 ATXN7L3Q14CW9 347 aaPredicted RBP17.2■□□□□ 0.34
COL18A1-204ENST00000400337 TSC22D1Q15714 1073 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 TBRG1Q3YBR2 411 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 ANKLE1Q8NAG6 615 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 HPF1Q9NWY4 346 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 PCDH17O14917 1159 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 ZNF16P17020 682 aaPredicted RBP17.2■□□□□ 0.34
COL18A1-204ENST00000400337 MAP2K3P46734 347 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 NR0B1P51843 470 aaKnown RBP17.2■□□□□ 0.34
COL18A1-204ENST00000400337 POGLUT1Q8NBL1 392 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 GAL3ST3Q96A11 431 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 SLC22A12Q96S37 553 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 VNN2O95498 520 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 PROX2Q3B8N5 592 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 FCRLBQ6BAA4 426 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 ZNF584Q8IVC4 421 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 AKAP1Q92667 903 aaKnown RBP eCLIP17.2■□□□□ 0.347e-8■■■■□ 21.4
COL18A1-204ENST00000400337 TOE1Q96GM8 510 aaKnown RBP17.2■□□□□ 0.34
COL18A1-204ENST00000400337 LCKP06239 509 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 ALDOCP09972 364 aaKnown RBP17.2■□□□□ 0.34
COL18A1-204ENST00000400337 LCN1P31025 176 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 MAGEA2P43356 314 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 SGSHP51688 502 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 NFATC3Q12968 1075 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 SERTAD2Q14140 314 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 GRK1Q15835 563 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 VWA5B2Q8N398 1253 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 ANKK1Q8NFD2 765 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 KCNN1Q92952 543 aa17.2■□□□□ 0.34
COL18A1-204ENST00000400337 PDLIM5Q96HC4 596 aaKnown RBP17.2■□□□□ 0.34
COL18A1-204ENST00000400337 TCRBV5S1A1TA0A578 114 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 LDB3O75112 727 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 MAS1P04201 325 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 HOXC13P31276 330 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 EIF5AL1Q6IS14 154 aaKnown RBP17.19■□□□□ 0.34
COL18A1-204ENST00000400337 NLGN4XQ8N0W4 816 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 CWH43Q9H720 699 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 ZNF701Q9NV72 531 aaPredicted RBP17.19■□□□□ 0.34
COL18A1-204ENST00000400337 MARCH5Q9NX47 278 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 ELOAQ14241 798 aaKnown RBP17.19■□□□□ 0.34
COL18A1-204ENST00000400337 PIAS4Q8N2W9 510 aaPredicted RBP17.19■□□□□ 0.34
COL18A1-204ENST00000400337 OR2A12Q8NGT7 310 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 CREB3L1Q96BA8 519 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 PCDHA9Q9Y5H5 950 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 NPIPA5A0A0B4J1W7 369 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 NPIPA7E9PJI5 369 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 NPIPA8P0DM63 369 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 RPS15P62841 145 aaKnown RBP17.19■□□□□ 0.34
COL18A1-204ENST00000400337 LRRN1Q6UXK5 716 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 ALDH16A1Q8IZ83 802 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 LMNTD1Q8N9Z9 388 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 CYB561A3Q8NBI2 242 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 ELP5Q8TE02 316 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 BIRC8Q96P09 236 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 PITX2Q99697 317 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 MYH7BA7E2Y1 1941 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 C17orf105B2RV13 164 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 OTX2P32243 289 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 ERVFC1P60507 584 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 MS4A15Q8N5U1 240 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 OR13C3Q8NGS6 347 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 TMIGD2Q96BF3 282 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 BMFQ96LC9 184 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 NAA11Q9BSU3 229 aaPredicted RBP17.19■□□□□ 0.34
COL18A1-204ENST00000400337 CLMPQ9H6B4 373 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 AGPAT4Q9NRZ5 378 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 PARPBPQ9NWS1 579 aa17.19■□□□□ 0.34
COL18A1-204ENST00000400337 PLATP00750 562 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 FAM78AQ5JUQ0 283 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 RTL10Q7L3V2 364 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 CPOQ8IVL8 374 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 OR6C4Q8NGE1 309 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 UTP4Q969X6 686 aaKnown RBP17.18■□□□□ 0.34
COL18A1-204ENST00000400337 UBXN10Q96LJ8 280 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 ZIC5Q96T25 663 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 MLXQ9UH92 298 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 CCL26Q9Y258 94 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 PRSS38A1L453 326 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 CTBSQ01459 385 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 DCP2Q8IU60 420 aaKnown RBP17.18■□□□□ 0.34
COL18A1-204ENST00000400337 ZNF619Q8N2I2 560 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 PINK1Q9BXM7 581 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 ABCG5Q9H222 651 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 GON4LQ3T8J9 2241 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 E2F3O00716 465 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 KLKB1P03952 638 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 GKN3PP0CG01 181 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 GJA4P35212 333 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 FAM26DQ5JW98 314 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 PRR22Q8IZ63 422 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 CUEDC1Q9NWM3 386 aaPredicted RBP17.18■□□□□ 0.34
COL18A1-204ENST00000400337 OR6C2Q9NZP2 312 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 SLAMF8Q9P0V8 285 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 SLC7A11Q9UPY5 501 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 MAGED1Q9Y5V3 778 aaPredicted RBP17.18■□□□□ 0.34
COL18A1-204ENST00000400337 HHLA1C9JL84 531 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms