RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 A8MVJ9 347 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 LCKP06239 509 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 CRYZQ08257 329 aaKnown RBP13.18□□□□□ -0.3
SCAF4-202ENST00000399804 FGL2Q14314 439 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 PYDC2Q56P42 97 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 PODNL1Q6PEZ8 512 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 PTOV1Q86YD1 416 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 KLHL36Q8N4N3 616 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 FANK1Q8TC84 345 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 GABRG3Q99928 467 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 MND1Q9BWT6 205 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 TAPBPLQ9BX59 468 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 TCEAL2Q9H3H9 227 aaPredicted RBP13.18□□□□□ -0.3
SCAF4-202ENST00000399804 ERVK-11Q9UQG0 969 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 TRBV4-1A0A0J9YWV2 114 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 A0A1B0GVT2 93 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.18□□□□□ -0.3
SCAF4-202ENST00000399804 PRAMEF2O60811 474 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 SMIM18P0DKX4 95 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 CDK4P11802 303 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 GGT2P36268 569 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 SERTAD2Q14140 314 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 TAF13Q15543 124 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 ZNF691Q5VV52 312 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 FRRS1Q6ZNA5 592 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 NLGN4XQ8N0W4 816 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 PAPD5Q8NDF8 572 aaKnown RBP13.18□□□□□ -0.3
SCAF4-202ENST00000399804 ADAMTS18Q8TE60 1221 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 ITFG2Q969R8 447 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 TBC1D20Q96BZ9 403 aa13.18□□□□□ -0.3
SCAF4-202ENST00000399804 NPLQ9BXD5 320 aaPredicted RBP13.18□□□□□ -0.3
SCAF4-202ENST00000399804 LOC105369274A0A096LPK9 316 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 LOC102723532A0A0G2JNH3 316 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 CLCA1A8K7I4 914 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 C17orf105B2RV13 164 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 CPNE3O75131 537 aaKnown RBP13.17□□□□□ -0.3
SCAF4-202ENST00000399804 SLC5A2P31639 672 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 ENTPD1P49961 510 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 RAE1P78406 368 aaKnown RBP13.17□□□□□ -0.3
SCAF4-202ENST00000399804 ELOAQ14241 798 aaKnown RBP13.17□□□□□ -0.3
SCAF4-202ENST00000399804 ALG10BQ5I7T1 473 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 DCST2Q5T1A1 773 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 DGLUCYQ7Z3D6 616 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 LHFPL3Q86UP9 236 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 OR4N4Q8N0Y3 316 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 SDR16C5Q8N3Y7 309 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 FAM174AQ8TBP5 190 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 ENKURQ8TC29 256 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 VWCEQ96DN2 955 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 TCTN2Q96GX1 697 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 DIRAS2Q96HU8 199 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 SEMA6CQ9H3T2 930 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 RLIMQ9NVW2 624 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 THSD7BQ9C0I4 1608 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 SCO2O43819 266 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 TEAD1P28347 426 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 MRPL19P49406 292 aaKnown RBP13.17□□□□□ -0.3
SCAF4-202ENST00000399804 CCR5P51681 352 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 PUS10Q3MIT2 529 aaKnown RBP13.17□□□□□ -0.3
SCAF4-202ENST00000399804 NKAIN2Q5VXU1 208 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 PRSS48Q7RTY5 328 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 BMFQ96LC9 184 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 PRRC1Q96M27 445 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 SLC6A20Q9NP91 592 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 C1GALT1Q9NS00 363 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 ZNF624Q9P2J8 865 aaPredicted RBP13.17□□□□□ -0.3
SCAF4-202ENST00000399804 RARRES3Q9UL19 164 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 PADI2Q9Y2J8 665 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 GREB1Q4ZG55 1949 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 SPAG17Q6Q759 2223 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 SOD1P00441 154 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 SLC6A6P31641 620 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 RORAP35398 523 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 TSFMP43897 325 aaKnown RBP13.17□□□□□ -0.3
SCAF4-202ENST00000399804 AFF3P51826 1226 aaKnown RBP13.17□□□□□ -0.3
SCAF4-202ENST00000399804 WNT3P56703 355 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 PLCXD2Q0VAA5 305 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 GBX1Q14549 363 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 ARL9Q6T311 187 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 FAM131AQ6UXB0 335 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 NANOGNBQ7Z5D8 188 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 ZNF619Q8N2I2 560 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 ZNF433Q8N7K0 673 aaPredicted RBP13.17□□□□□ -0.3
SCAF4-202ENST00000399804 LGALS12Q96DT0 336 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 CNDP2Q96KP4 475 aaKnown RBP13.17□□□□□ -0.3
SCAF4-202ENST00000399804 SLC7A7Q9UM01 511 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 CLEC4AQ9UMR7 237 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 DAPP1Q9UN19 280 aa13.17□□□□□ -0.3
SCAF4-202ENST00000399804 ADAM23O75077 832 aa13.16□□□□□ -0.3
SCAF4-202ENST00000399804 ITGAMP11215 1152 aa13.16□□□□□ -0.3
SCAF4-202ENST00000399804 ST6GAL1P15907 406 aa13.16□□□□□ -0.3
SCAF4-202ENST00000399804 PON3Q15166 354 aa13.16□□□□□ -0.3
SCAF4-202ENST00000399804 PRR14Q9BWN1 585 aa13.16□□□□□ -0.3
SCAF4-202ENST00000399804 LTB4R2Q9NPC1 389 aa13.16□□□□□ -0.3
SCAF4-202ENST00000399804 KLRF1Q9NZS2 232 aa13.16□□□□□ -0.3
SCAF4-202ENST00000399804 UNC119BA6NIH7 251 aa13.16□□□□□ -0.3
SCAF4-202ENST00000399804 AKAP8O43823 692 aaKnown RBP13.16□□□□□ -0.3
SCAF4-202ENST00000399804 DNAJB5O75953 348 aa13.16□□□□□ -0.3
SCAF4-202ENST00000399804 CLPXO76031 633 aa13.16□□□□□ -0.3
SCAF4-202ENST00000399804 GASTP01350 101 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms