RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 QRSL1Q9H0R6 528 aaKnown RBP13.14□□□□□ -0.31
APOB-202ENST00000399256 OR51J1Q9H342 316 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 ISG20L2Q9H9L3 353 aaKnown RBP13.14□□□□□ -0.31
APOB-202ENST00000399256 C12orf10Q9HB07 376 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 TDP1Q9NUW8 608 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 P2RX2Q9UBL9 471 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 SLC9A8Q9Y2E8 581 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 A0A087WUU8 490 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 XPAP23025 273 aaPredicted RBP13.14□□□□□ -0.31
APOB-202ENST00000399256 TAGLNQ01995 201 aaKnown RBP13.14□□□□□ -0.31
APOB-202ENST00000399256 C16orf62Q7Z3J2 963 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 GALNT11Q8NCW6 608 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 BEST4Q8NFU0 473 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 OR5M3Q8NGP4 307 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 TM4SF18Q96CE8 201 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 NRTNQ99748 197 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 SGPP1Q9BX95 441 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 OSGEPL1Q9H4B0 414 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 CLEC4AQ9UMR7 237 aa13.14□□□□□ -0.31
APOB-202ENST00000399256 TEX13CA0A0J9YWL9 993 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 EFCAB14O75071 495 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 GNSP15586 552 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 ATF4P18848 351 aaPredicted RBP13.13□□□□□ -0.31
APOB-202ENST00000399256 PTNP21246 168 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 GSTM3P21266 225 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 AHCYP23526 432 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 CFL1P23528 166 aaKnown RBP13.13□□□□□ -0.31
APOB-202ENST00000399256 PRKAG1P54619 331 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 POLR2LP62875 67 aaKnown RBP13.13□□□□□ -0.31
APOB-202ENST00000399256 SNTA1Q13424 505 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 AANATQ16613 207 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 ADGRD2Q7Z7M1 963 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 POGLUT1Q8NBL1 392 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 GLYATL1Q969I3 302 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 PRRC1Q96M27 445 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 CYSLTR2Q9NS75 346 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 MRPL39Q9NYK5 338 aaKnown RBP13.13□□□□□ -0.31
APOB-202ENST00000399256 HS3ST2Q9Y278 367 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 RPS10-NUDT3A0A1W2PQS6 291 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 C7orf66A4D0T2 115 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 CHST10O43529 356 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 SLC2A10O95528 541 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 MPC2O95563 127 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 TRIM23P36406 574 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 OR10A3P58181 314 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 MFSD13AQ14CX5 517 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 LGALSLQ3ZCW2 172 aaPredicted RBP13.13□□□□□ -0.31
APOB-202ENST00000399256 FAM27D1Q5T7N8 215 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 FBXO15Q8NCQ5 510 aaPredicted RBP13.13□□□□□ -0.31
APOB-202ENST00000399256 KLK6Q92876 244 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 TIFAQ96CG3 184 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 SLC35G5Q96KT7 338 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 SORCS2Q96PQ0 1159 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 ABHD1Q96SE0 405 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 BEX1Q9HBH7 125 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 NEUROD4Q9HD90 331 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 PITPNBP48739 271 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 COL28A1Q2UY09 1125 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 KLHL12Q53G59 568 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 ARHGAP15Q53QZ3 475 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 GPR139Q6DWJ6 353 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 ASTLQ6HA08 431 aaPredicted RBP13.13□□□□□ -0.31
APOB-202ENST00000399256 LYPD4Q6UWN0 246 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 TRMT11Q7Z4G4 463 aaKnown RBP13.13□□□□□ -0.31
APOB-202ENST00000399256 LRRC28Q86X40 367 aaPredicted RBP13.13□□□□□ -0.31
APOB-202ENST00000399256 OR9A1PQ8NGU1 263 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 OR4Q3Q8NH05 313 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 FCRL4Q96PJ5 515 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 TBX5Q99593 518 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 SMAD5Q99717 465 aaKnown RBP13.13□□□□□ -0.31
APOB-202ENST00000399256 ZNF649Q9BS31 505 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 BTBD1Q9H0C5 482 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 DPAGT1Q9H3H5 408 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 DDX31Q9H8H2 851 aaKnown RBP13.13□□□□□ -0.31
APOB-202ENST00000399256 C12orf4Q9NQ89 552 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 SLC25A13Q9UJS0 675 aa13.13□□□□□ -0.31
APOB-202ENST00000399256 SIRT4Q9Y6E7 314 aaPredicted RBP13.13□□□□□ -0.31
APOB-202ENST00000399256 A0A0G2JN53 185 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 RGS9O75916 674 aaPredicted RBP13.12□□□□□ -0.31
APOB-202ENST00000399256 SHC1P29353 583 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 CLCNKAP51800 687 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 EPHA5P54756 1037 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 TAS2R41P59536 307 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 WASH2PQ6VEQ5 465 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 NPAS4Q8IUM7 802 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 ACOT12Q8WYK0 555 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 CLEC4MQ9H2X3 399 aaPredicted RBP13.12□□□□□ -0.31
APOB-202ENST00000399256 RASD1Q9Y272 281 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 CSNK1G3Q9Y6M4 447 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 FAM183AA6NL82 134 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 CPSF4LA6NMK7 179 aaKnown RBP13.12□□□□□ -0.31
APOB-202ENST00000399256 SOCS6O14544 535 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 RNF13O43567 381 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 ABLIM3O94929 683 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 TBX6O95947 436 aaPredicted RBP13.12□□□□□ -0.31
APOB-202ENST00000399256 TCRBP04435 133 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 CD3GP09693 182 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 GJA1P17302 382 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 GIFP27352 417 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 PPP2R1BP30154 601 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms