RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 TCEAL1Q15170 157 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 LEG1Q6P5S2 330 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 ZFP41Q8N8Y5 198 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 SCGB1C1Q8TD33 95 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 C12orf43Q96C57 262 aaKnown RBP13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 ANKMY1Q9P2S6 941 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 THAP10Q9P2Z0 257 aaPredicted RBP13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 PCDHGB6Q9Y5F9 930 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 TRBV2A0A0J9YWF9 115 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 EEF1E1O43324 174 aaKnown RBP13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 CACNG3O60359 315 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 AMY2BP19961 511 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 CERS1P27544 350 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 EIF2DP41214 584 aaKnown RBP13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 AIMP2Q13155 320 aaKnown RBP13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 RPA4Q13156 261 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 TMEM69Q5SWH9 247 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 CLECL1Q8IZS7 167 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 KCNN1Q92952 543 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 MTMR10Q9NXD2 777 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 RDH16O75452 317 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 RFPL1O75677 317 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 SNAP29O95721 258 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 ARSDP51689 593 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 CDK3Q00526 305 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 KLBQ86Z14 1044 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 UEVLDQ8IX04 471 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 PRR18Q8N4B5 295 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 OR52B6Q8NGF0 335 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 CCDC106Q9BWC9 280 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 DNTTIP1Q9H147 329 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 KCNN3Q9UGI6 736 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 SCAMP2O15127 329 aaKnown RBP13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 RIDAP52758 137 aaKnown RBP13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 SUN5Q8TC36 379 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 FOXQ1Q9C009 403 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 CD63P08962 238 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 GCH1P30793 250 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 ATP4BP51164 291 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 YPEL5P62699 121 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 STOML3Q8TAV4 291 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 MACROD1Q9BQ69 325 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 SH3PXD2BA1X283 911 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 ZNF43P17038 809 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 POU3F2P20265 443 aaPredicted RBP13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 ITGB8P26012 769 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 APLNRP35414 380 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 RPS26P11Q5JNZ5 115 aaPredicted RBP13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 GALNT6Q8NCL4 622 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 OR4K13Q8NH42 304 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 COQ8AQ8NI60 647 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 ADAMTS18Q8TE60 1221 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 MOV10Q9HCE1 1003 aaKnown RBP13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 TRBV11-1A0A0K0K1C0 115 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 PPM1BO75688 479 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 PYCR1P32322 319 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 HMGCLP35914 325 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 CSNK1DP48730 415 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 TAS2R38P59533 333 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 VMACQ2NL98 169 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 UGT3A2Q3SY77 523 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 ZNF404Q494X3 552 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 MEDAGQ5VYS4 303 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 TM9SF4Q92544 642 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 HOXB13Q92826 284 aaPredicted RBP13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 MAL2Q969L2 176 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 RFT1Q96AA3 541 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 MUS81Q96NY9 551 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 TWSG1Q9GZX9 223 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 MUTYHQ9UIF7 546 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 RREB1Q92766 1687 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 MYH9P35579 1960 aaKnown RBP13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 ETFAP13804 333 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 CD40LGP29965 261 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 CHRNEQ04844 493 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 CLCA4Q14CN2 919 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 ZNF77Q15935 545 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 FAM205BPQ63HN1 556 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 ATG9BQ674R7 924 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 SPAG16Q8N0X2 631 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 OR8J3Q8NGG0 315 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 DTD2Q96FN9 168 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 ADAMTS7Q9UKP4 1686 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 A0A0J9YY10 115 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 NPIPB15A6NHN6 443 aaPredicted RBP13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 FAM171A2A8MVW0 826 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 PRAMEF2O60811 474 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 F10P00742 488 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 GNAO1P09471 354 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 FRKP42685 505 aaPredicted RBP13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 NPWQ8N729 165 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 ZNF778Q96MU6 729 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 TMEM184CQ9NVA4 438 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 ECM29Q5VYK3 1845 aa13.48□□□□□ -0.25
PCDHA11-201ENST00000398640 LOC102723532A0A0G2JNH3 316 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 IFNGR1P15260 489 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 HOXB9P17482 250 aaPredicted RBP13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 ENDOUP21128 410 aaKnown RBP13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 C22orf42Q6IC83 251 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 EIF5AL1Q6IS14 154 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms