RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 SLC39A1Q9NY26 324 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 B4E171 279 aa18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 TGFBR3LH3BV60 316 aa18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 EMC8O43402 210 aa18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 MT-CO3P00414 261 aa18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 NUDT7P0C024 238 aa18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 MAOAP21397 527 aa18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 AGXTP21549 392 aa18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 NT5EP21589 574 aa18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 ACVR2AP27037 513 aa18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 TSPAN7P41732 249 aa18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 PRR5P85299 388 aa18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 IL5RAQ01344 420 aa18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 RAPSNQ13702 412 aa18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 BHLHB9Q6PI77 547 aa18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 MED25Q71SY5 747 aa18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 CYP4Z1Q86W10 505 aa18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 PTOV1Q86YD1 416 aa18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 MOAP1Q96BY2 351 aa18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 ALOXE3Q9BYJ1 711 aa18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 MKKSQ9NPJ1 570 aaPredicted RBP18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 NECTIN3Q9NQS3 549 aa18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 VNN3Q9NY84 501 aa18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 WARS2Q9UGM6 360 aaKnown RBP18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 NDRG4Q9ULP0 352 aaKnown RBP18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 LOXL2Q9Y4K0 774 aa18.04■□□□□ 0.48
PDLIM2-204ENST00000397760 SLC22A1O15245 554 aa18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 OR10H2O60403 315 aa18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 GABARAPO95166 117 aa18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 DAPP51397 102 aa18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 SLC35A2P78381 396 aa18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 IGLV3-21P80748 117 aaPredicted RBP18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 DCDP81605 110 aaKnown RBP18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 NKAIN1Q4KMZ8 207 aa18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 ZNF628Q5EBL2 1059 aa18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 VWA2Q5GFL6 755 aa18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 MFSD4BQ5TF39 518 aa18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 SLC16A12Q6ZSM3 486 aa18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 SVOPQ8N4V2 548 aa18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 OR7G2Q8NG99 324 aa18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 OR56A1Q8NGH5 318 aa18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 COX4I2Q96KJ9 171 aa18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 PHOX2BQ99453 314 aa18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 PITX2Q99697 317 aa18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 ANKRA2Q9H9E1 313 aa18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 SLC22A11Q9NSA0 550 aa18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 ABCG2Q9UNQ0 655 aa18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 MMACHCQ9Y4U1 282 aa18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 CLDN16Q9Y5I7 305 aa18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 U3KQV3 271 aa18.03■□□□□ 0.48
PDLIM2-204ENST00000397760 hCG_2014768A0A024R1R8 64 aa18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 E9PQ18 207 aa18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 CPNE3O75131 537 aaKnown RBP18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 BCAS1O75363 584 aaPredicted RBP18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 CSO75390 466 aaKnown RBP18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 TNFRSF21O75509 655 aa18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 RPS26P62854 115 aaKnown RBP18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 ELOAQ14241 798 aaKnown RBP18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 MINDY4Q4G0A6 757 aa18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 FAHD1Q6P587 224 aa18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 FAM111BQ6SJ93 734 aa18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 COX15Q7KZN9 410 aa18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 ASCL5Q7RTU5 278 aa18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 SLCO6A1Q86UG4 719 aa18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 NUP43Q8NFH3 380 aa18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 DOK4Q8TEW6 326 aa18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 FAR1Q8WVX9 515 aa18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 IPCEF1Q8WWN9 437 aaPredicted RBP18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 RBM18Q96H35 190 aaKnown RBP18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 PTCHD1Q96NR3 888 aa18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 EPYCQ99645 322 aa18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 PAK1IP1Q9NWT1 392 aaPredicted RBP18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 PTGFRNQ9P2B2 879 aa18.02■□□□□ 0.48
PDLIM2-204ENST00000397760 SOX18P35713 384 aa18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 PRIM2P49643 509 aa18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 GP2P55259 537 aaKnown RBP18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 EMX1Q04741 257 aaPredicted RBP18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 CTF1Q16619 201 aa18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 PRICKLE4Q2TBC4 344 aa18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 TRMT12Q53H54 448 aaKnown RBP18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 GCNT6Q5T4J0 391 aa18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 ZNF385CQ66K41 422 aaPredicted RBP18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 ANKRD34AQ69YU3 496 aa18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 TNFAIP8L2Q6P589 184 aaPredicted RBP18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 CEACAM20Q6UY09 585 aa18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 RAB11FIP2Q7L804 512 aa18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 HORMAD2Q8N7B1 307 aa18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 GIPC3Q8TF64 312 aa18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 SGCDQ92629 289 aa18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 RORBQ92753 470 aa18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 ABTB1Q969K4 478 aaPredicted RBP18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 VMP1Q96GC9 406 aa18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 SLC35G5Q96KT7 338 aa18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 DGAT2Q96PD7 388 aa18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 DEPDC7Q96QD5 511 aa18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 ZNF347Q96SE7 839 aa18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 REEP1Q9H902 201 aa18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 NTMQ9P121 344 aa18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 CTSFQ9UBX1 484 aa18.02■□□□□ 0.47
PDLIM2-204ENST00000397760 GMPPBQ9Y5P6 360 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms