RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 HNRNPCL4P0DMR1 293 aa21.83■■□□□ 1.09
TSPAN4-202ENST00000397396 CT45A8P0DMV1 189 aa21.83■■□□□ 1.09
TSPAN4-202ENST00000397396 CT45A9P0DMV2 189 aa21.83■■□□□ 1.09
TSPAN4-202ENST00000397396 SPINK2P20155 84 aa21.83■■□□□ 1.09
TSPAN4-202ENST00000397396 MSX2P35548 267 aaPredicted RBP21.83■■□□□ 1.09
TSPAN4-202ENST00000397396 NRG3P56975 720 aa21.83■■□□□ 1.09
TSPAN4-202ENST00000397396 CT45A2Q5DJT8 189 aa21.83■■□□□ 1.09
TSPAN4-202ENST00000397396 DCST2Q5T1A1 773 aa21.83■■□□□ 1.09
TSPAN4-202ENST00000397396 CCDC80Q76M96 950 aa21.83■■□□□ 1.09
TSPAN4-202ENST00000397396 EID3Q8N140 333 aa21.83■■□□□ 1.09
TSPAN4-202ENST00000397396 GOLM1Q8NBJ4 401 aa21.83■■□□□ 1.09
TSPAN4-202ENST00000397396 THAP4Q8WY91 577 aa21.83■■□□□ 1.09
TSPAN4-202ENST00000397396 ADIPOR1Q96A54 375 aa21.83■■□□□ 1.09
TSPAN4-202ENST00000397396 OTUB1Q96FW1 271 aaPredicted RBP21.83■■□□□ 1.09
TSPAN4-202ENST00000397396 ZNF607Q96SK3 696 aa21.83■■□□□ 1.09
TSPAN4-202ENST00000397396 MESP1Q9BRJ9 268 aa21.83■■□□□ 1.09
TSPAN4-202ENST00000397396 SPATA5L1Q9BVQ7 753 aa21.83■■□□□ 1.09
TSPAN4-202ENST00000397396 WDR70Q9NW82 654 aa21.83■■□□□ 1.09
TSPAN4-202ENST00000397396 GMPR2Q9P2T1 348 aaKnown RBP21.83■■□□□ 1.09
TSPAN4-202ENST00000397396 CBLCQ9ULV8 474 aa21.83■■□□□ 1.09
TSPAN4-202ENST00000397396 USP22Q9UPT9 525 aa21.83■■□□□ 1.09
TSPAN4-202ENST00000397396 AQP12BA6NM10 295 aa21.82■■□□□ 1.08
TSPAN4-202ENST00000397396 STX11O75558 287 aa21.82■■□□□ 1.08
TSPAN4-202ENST00000397396 ATP6V1C1P21283 382 aa21.82■■□□□ 1.08
TSPAN4-202ENST00000397396 LCN1P31025 176 aa21.82■■□□□ 1.08
TSPAN4-202ENST00000397396 PIGAP37287 484 aa21.82■■□□□ 1.08
TSPAN4-202ENST00000397396 CORO7P57737 925 aa21.82■■□□□ 1.08
TSPAN4-202ENST00000397396 MS4A2Q01362 244 aa21.82■■□□□ 1.08
TSPAN4-202ENST00000397396 DECR1Q16698 335 aa21.82■■□□□ 1.08
TSPAN4-202ENST00000397396 WDR53Q7Z5U6 358 aaPredicted RBP21.82■■□□□ 1.08
TSPAN4-202ENST00000397396 AQP12AQ8IXF9 295 aa21.82■■□□□ 1.08
TSPAN4-202ENST00000397396 TAGAPQ8N103 731 aa21.82■■□□□ 1.08
TSPAN4-202ENST00000397396 ZNF441Q8N8Z8 693 aa21.82■■□□□ 1.08
TSPAN4-202ENST00000397396 ZNF223Q9UK11 482 aaPredicted RBP21.82■■□□□ 1.08
TSPAN4-202ENST00000397396 RPS6KA6Q9UK32 745 aa21.82■■□□□ 1.08
TSPAN4-202ENST00000397396 RRP15Q9Y3B9 282 aaKnown RBP21.82■■□□□ 1.08
TSPAN4-202ENST00000397396 ZNF891A8MT65 544 aaPredicted RBP21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 SERPINA7P05543 415 aa21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 ETS2P15036 469 aa21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 HOXB6P17509 224 aaKnown RBP21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 KDELR2P33947 212 aa21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 SOX11P35716 441 aa21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 KRT20P35900 424 aa21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 PCBP3P57721 371 aaKnown RBP21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 ACTR3P61158 418 aa21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 MRPS22P82650 360 aaKnown RBP21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 ATP1A4Q13733 1029 aa21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 SYPL1Q16563 259 aa21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 NPSR1Q6W5P4 371 aa21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 KBTBD2Q8IY47 623 aa21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 ANKFN1Q8N957 763 aa21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 RASSF5Q8WWW0 418 aa21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 OIT3Q8WWZ8 545 aa21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 PIK3R3Q92569 461 aa21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 RMND5BQ96G75 393 aaPredicted RBP21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 ZNF350Q9GZX5 532 aa21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 NXF5Q9H1B4 397 aaKnown RBP21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 SAMD4AQ9UPU9 718 aaKnown RBP21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 WDR45Q9Y484 360 aa21.81■■□□□ 1.08
TSPAN4-202ENST00000397396 NME6O75414 186 aaPredicted RBP21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 SERPINB7O75635 380 aa21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 KCNK2O95069 426 aa21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 PGM3O95394 542 aa21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 H6PDO95479 791 aa21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 NCK1P16333 377 aa21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 RRADP55042 308 aa21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 FUT5Q11128 374 aa21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 CRB2Q5IJ48 1285 aa21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 JMJD6Q6NYC1 403 aaPredicted RBP21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 VASH2Q86V25 355 aa21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 SLC5A8Q8N695 610 aa21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 BHLHE22Q8NFJ8 381 aaPredicted RBP21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 SLC22A8Q8TCC7 542 aa21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 SDF2Q99470 211 aa21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 TREX2Q9BQ50 279 aaPredicted RBP21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 ADPRHL2Q9NX46 363 aa21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 KCNE3Q9Y6H6 103 aa21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 CDC14CA4D256 554 aa21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 TMED10P49755 219 aaKnown RBP21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 NR0B1P51843 470 aaKnown RBP21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 AIMP2Q13155 320 aaKnown RBP21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 LRRC23Q53EV4 343 aaPredicted RBP21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 AP1ARQ63HQ0 302 aa21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 SLC34A3Q8N130 599 aa21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 SLC15A4Q8N697 577 aa21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 CLEC1AQ8NC01 280 aa21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 FAM110BQ8TC76 370 aa21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 OLAHQ9NV23 265 aa21.8■■□□□ 1.08
TSPAN4-202ENST00000397396 DSPPQ9NZW4 1301 aa21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 GXYLT2A0PJZ3 443 aa21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 PRAMEF27A3QJZ7 478 aa21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 ABCB7O75027 752 aa21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 CHRM4P08173 479 aa21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 ATP6V1B2P21281 511 aa21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 DMTNQ08495 405 aa21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 PLCXD2Q0VAA5 305 aa21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 CHAF1BQ13112 559 aa21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 KPNB1Q14974 876 aaKnown RBP21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 CYP2R1Q6VVX0 501 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms