RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 C6orf136Q5SQH8 315 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 PRAMEF20Q5VT98 475 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 FBXW10Q5XX13 1052 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 TMEM198Q66K66 360 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 OGFOD2Q6N063 350 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 XKRXQ6PP77 449 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 TMEM64Q6YI46 380 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 RINLQ6ZS11 566 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 LARP4Q71RC2 724 aaKnown RBP eCLIP13.37□□□□□ -0.273e-7■□□□□ 9.8
SEC13-208ENST00000397109 NUP54Q7Z3B4 507 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 FGD2Q7Z6J4 655 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 DOLPP1Q86YN1 238 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 ZNF808Q8N4W9 903 aaPredicted RBP13.37□□□□□ -0.27
SEC13-208ENST00000397109 KAT2AQ92830 837 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 UTP4Q969X6 686 aaKnown RBP13.37□□□□□ -0.27
SEC13-208ENST00000397109 ZNF764Q96H86 408 aaPredicted RBP13.37□□□□□ -0.27
SEC13-208ENST00000397109 VKORC1Q9BQB6 163 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 PROK2Q9HC23 129 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 QPCTLQ9NXS2 382 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 TAS2R9Q9NYW1 312 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 DTX4Q9Y2E6 619 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 MEMO1Q9Y316 297 aa13.37□□□□□ -0.27
SEC13-208ENST00000397109 A0A087WV62 115 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 OR14I1A6ND48 311 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 FRG2CA6NGY1 282 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 TO15178 435 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 SUSD5O60279 629 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 COQ9O75208 318 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 PPM1BO75688 479 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 TPOP07202 933 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 ABCB1P08183 1280 aaPredicted RBP13.36□□□□□ -0.27
SEC13-208ENST00000397109 COX4I1P13073 169 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 DDX5P17844 614 aaKnown RBP13.36□□□□□ -0.27
SEC13-208ENST00000397109 AGAP20933 346 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 MAGEA5P43359 124 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 MRPL19P49406 292 aaKnown RBP13.36□□□□□ -0.27
SEC13-208ENST00000397109 NCBP2P52298 156 aaKnown RBP eCLIP13.36□□□□□ -0.27
SEC13-208ENST00000397109 ART3Q13508 389 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 RFTN2Q52LD8 501 aaPredicted RBP13.36□□□□□ -0.27
SEC13-208ENST00000397109 NXNQ6DKJ4 435 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 RBM15BQ8NDT2 890 aaKnown RBP13.36□□□□□ -0.27
SEC13-208ENST00000397109 PHF10Q8WUB8 498 aaKnown RBP13.36□□□□□ -0.27
SEC13-208ENST00000397109 ITLN2Q8WWU7 325 aaPredicted RBP13.36□□□□□ -0.27
SEC13-208ENST00000397109 TUBGCP3Q96CW5 907 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 ZNF597Q96LX8 424 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 ANGPTL4Q9BY76 406 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 WDR55Q9H6Y2 383 aaPredicted RBP13.36□□□□□ -0.27
SEC13-208ENST00000397109 AKTIPQ9H8T0 292 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 ASIC5Q9NY37 505 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 B4GALT7Q9UBV7 327 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 GPR55Q9Y2T6 319 aaPredicted RBP13.36□□□□□ -0.27
SEC13-208ENST00000397109 A0A1B0GVC2 190 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 PLOD2O00469 737 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 BCKDKO14874 412 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 UBDO15205 165 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 HCN1O60741 890 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 TBX19O60806 448 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 ATP6V1G2O95670 118 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 IFI6P09912 130 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 TACR1P25103 407 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 MAPK1P28482 360 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 PGM1P36871 562 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 ASMTP46597 345 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 RPL38P63173 70 aaKnown RBP13.36□□□□□ -0.27
SEC13-208ENST00000397109 PLCXD2Q0VAA5 305 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 STX5Q13190 355 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 CYLC2Q14093 348 aaPredicted RBP13.36□□□□□ -0.27
SEC13-208ENST00000397109 SQLEQ14534 574 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 NNATQ16517 81 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 TMEM211Q6ICI0 200 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 TMEM81Q6P7N7 255 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 TRILQ7L0X0 811 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 MRGPRGQ86SM5 289 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 CD163Q86VB7 1156 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 PACS2Q86VP3 889 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 PRR22Q8IZ63 422 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 SLC34A3Q8N130 599 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 SIMC1Q8NDZ2 872 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 OMA1Q96E52 524 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 EGLN2Q96KS0 407 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 BTBD9Q96Q07 612 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 PHF12Q96QT6 1004 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 REEP4Q9H6H4 257 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 LDAHQ9H6V9 325 aa13.36□□□□□ -0.27
SEC13-208ENST00000397109 EXO1Q9UQ84 846 aaKnown RBP13.36□□□□□ -0.27
SEC13-208ENST00000397109 NAV2Q8IVL1 2488 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 NCOA6Q14686 2063 aaPredicted RBP13.35□□□□□ -0.27
SEC13-208ENST00000397109 AQP7O14520 342 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 ZNHIT1O43257 154 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 ABCB7O75027 752 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 PEX11AO75192 247 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 TRIM3O75382 744 aaPredicted RBP13.35□□□□□ -0.27
SEC13-208ENST00000397109 ERN1O75460 977 aaKnown RBP13.35□□□□□ -0.27
SEC13-208ENST00000397109 LBPP18428 481 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 SDC1P18827 310 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 KRT20P35900 424 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 CPOXP36551 454 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 CASP3P42574 277 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 MAN2A2P49641 1150 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 MXRA7P84157 204 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms