RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 ITGA3P26006 1051 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 EMP3P54852 163 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 GRM7Q14831 915 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 MLC1Q15049 377 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 NDUFA9Q16795 377 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 COX20Q5RI15 118 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 FRMPD2BQ6IN97 320 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 MAMDC2Q7Z304 686 aaPredicted RBP16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 OR4N4Q8N0Y3 316 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 AMER3Q8N944 861 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 WDR77Q9BQA1 342 aaPredicted RBP16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 NPLQ9BXD5 320 aaPredicted RBP16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 CLK4Q9HAZ1 481 aaKnown RBP16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 IL1RAPQ9NPH3 570 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 TEX10Q9NXF1 929 aaPredicted RBP16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 CTSFQ9UBX1 484 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 PSME2Q9UL46 239 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 ASB4Q9Y574 426 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 HS3ST3B1Q9Y662 390 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 FITM1A5D6W6 292 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 PDPK1O15530 556 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 B3GALT2O43825 422 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 ALOX12BO75342 701 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 KRT75O95678 551 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 ALPLP05186 524 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 ZNF888P0CJ79 500 aaPredicted RBP16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 ETFAP13804 333 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 CAPGP40121 348 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 CRYBA2P53672 197 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 RAB8AP61006 207 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 BTN3A2P78410 334 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 EEF1A2Q05639 463 aaKnown RBP16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 ELOAQ14241 798 aaKnown RBP16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 GCNT6Q5T4J0 391 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 GARNL3Q5VVW2 1013 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 KIRREL2Q6UWL6 708 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 IGFL2Q6UWQ7 119 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 ZDHHC13Q8IUH4 622 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 ZDHHC21Q8IVQ6 265 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 SAMD14Q8IZD0 417 aaPredicted RBP16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 OR5K1Q8NHB7 308 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 PSMA8Q8TAA3 256 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 MAGEE2Q8TD90 523 aaPredicted RBP16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 ZBED6CLQ96FA7 236 aaPredicted RBP16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 RDH12Q96NR8 316 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 CXorf36Q9H7Y0 433 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 SYNPO2LQ9H987 977 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 LYRM4Q9HD34 91 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 PNPLA3Q9NST1 481 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 ACSS1Q9NUB1 689 aaPredicted RBP16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 NXT1Q9UKK6 140 aaKnown RBP16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 FAF1Q9UNN5 650 aaPredicted RBP16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 SLC5A6Q9Y289 635 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 CSAG2Q9Y5P2 127 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 SPACA6W5XKT8 324 aa16.25■□□□□ 0.19
TNFSF13-205ENST00000396545 C4orf51C9J302 202 aa16.24■□□□□ 0.19
TNFSF13-205ENST00000396545 G3V2T6 193 aa16.24■□□□□ 0.19
TNFSF13-205ENST00000396545 H0YAE9 185 aa16.24■□□□□ 0.19
TNFSF13-205ENST00000396545 P2RX6O15547 441 aa16.24■□□□□ 0.19
TNFSF13-205ENST00000396545 GCM2O75603 506 aaPredicted RBP16.24■□□□□ 0.19
TNFSF13-205ENST00000396545 ZNF682O95780 498 aa16.24■□□□□ 0.19
TNFSF13-205ENST00000396545 TLX1P31314 330 aaPredicted RBP16.24■□□□□ 0.19
TNFSF13-205ENST00000396545 BUD31P41223 144 aaPredicted RBP16.24■□□□□ 0.19
TNFSF13-205ENST00000396545 VSX2P58304 361 aaPredicted RBP16.24■□□□□ 0.19
TNFSF13-205ENST00000396545 ADARB1P78563 741 aaKnown RBP16.24■□□□□ 0.19
TNFSF13-205ENST00000396545 PRTGQ2VWP7 1150 aa16.24■□□□□ 0.19
TNFSF13-205ENST00000396545 CYBRD1Q53TN4 286 aa16.24■□□□□ 0.19
TNFSF13-205ENST00000396545 NDUFAF5Q5TEU4 345 aa16.24■□□□□ 0.19
TNFSF13-205ENST00000396545 CCDC80Q76M96 950 aa16.24■□□□□ 0.19
TNFSF13-205ENST00000396545 DHRSXQ8N5I4 330 aa16.24■□□□□ 0.19
TNFSF13-205ENST00000396545 MACROD1Q9BQ69 325 aa16.24■□□□□ 0.19
TNFSF13-205ENST00000396545 NEUROD4Q9HD90 331 aa16.24■□□□□ 0.19
TNFSF13-205ENST00000396545 ABCA12Q86UK0 2595 aa16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 VSTM2BA6NLU5 285 aa16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 TMEM229AB2RXF0 380 aa16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 PROM1O43490 865 aa16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 EIF2S1P05198 315 aaKnown RBP16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 CERS1P27544 350 aa16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 DCTP40126 519 aa16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 CRATP43155 626 aa16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 ALDH9A1P49189 494 aa16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 PPP2R2BQ00005 443 aa16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 APOFQ13790 326 aa16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 AGAP7PQ5VUJ5 663 aa16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 SAXO2Q658L1 398 aa16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 USP51Q70EK9 711 aa16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 PIWIL3Q7Z3Z3 882 aaKnown RBP16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 STK32CQ86UX6 486 aa16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 TTC29Q8NA56 475 aaPredicted RBP16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 ZFP28Q8NHY6 868 aa16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 MAL2Q969L2 176 aa16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 NEURL3Q96EH8 262 aa16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 C5orf34Q96MH7 638 aa16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 AGAP4Q96P64 663 aa16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 OSBPL10Q9BXB5 764 aa16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 SOX17Q9H6I2 414 aaPredicted RBP16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 SIRT3Q9NTG7 399 aaPredicted RBP16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 GIMAP4Q9NUV9 329 aa16.23■□□□□ 0.19
TNFSF13-205ENST00000396545 CACNA1DQ01668 2161 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms