RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 GPR55Q9Y2T6 319 aaPredicted RBP13.97□□□□□ -0.17
CBX3-202ENST00000396386 CPSF4LA6NMK7 179 aaKnown RBP13.96□□□□□ -0.17
CBX3-202ENST00000396386 AP3D1O14617 1153 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 GSTM3P21266 225 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 NR4A1P22736 598 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 IFNGR2P38484 337 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 STT3AP46977 705 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 STARD6P59095 220 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 RPL6Q02878 288 aaKnown RBP13.96□□□□□ -0.17
CBX3-202ENST00000396386 ST3GAL3Q11203 375 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 BNIP3Q12983 259 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 PRICKLE4Q2TBC4 344 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 PRTGQ2VWP7 1150 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 DCST2Q5T1A1 773 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 C1orf94Q6P1W5 598 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 ZCCHC12Q6PEW1 402 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 COX18Q8N8Q8 333 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 B3GNT7Q8NFL0 401 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 C9orf43Q8TAL5 461 aaPredicted RBP13.96□□□□□ -0.17
CBX3-202ENST00000396386 ZG16BQ96DA0 208 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 TCTN2Q96GX1 697 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 STACQ99469 402 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 SLC38A3Q99624 504 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 ZNF350Q9GZX5 532 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 MIR1-1HGQ9H1L0 117 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 NECTIN3Q9NQS3 549 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 DUSP22Q9NRW4 184 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 ZNF232Q9UNY5 417 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 CHST2Q9Y4C5 530 aa13.96□□□□□ -0.17
CBX3-202ENST00000396386 CYP7B1O75881 506 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 AK1P00568 194 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 TP53P04637 393 aaPredicted RBP13.95□□□□□ -0.18
CBX3-202ENST00000396386 THBS1P07996 1170 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 IGFBP1P08833 259 aaPredicted RBP13.95□□□□□ -0.18
CBX3-202ENST00000396386 STSP08842 583 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 MAOBP27338 520 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 ALDH4A1P30038 563 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 C21orf33P30042 268 aaPredicted RBP13.95□□□□□ -0.18
CBX3-202ENST00000396386 TGFBR2P37173 567 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 TMEM201Q5SNT2 666 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 NIPAL1Q6NVV3 410 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 ZNF836Q6ZNA1 936 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 ZER1Q7Z7L7 766 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 SHISA5Q8N114 240 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 ZNF619Q8N2I2 560 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 ANKRD9Q96BM1 317 aaPredicted RBP13.95□□□□□ -0.18
CBX3-202ENST00000396386 Q96MT0 163 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 SDF2Q99470 211 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 SEMA4GQ9NTN9 838 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 THADAQ6YHU6 1953 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 CACNA1IQ9P0X4 2223 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 AQP9O43315 295 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 CHST10O43529 356 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 SRPX2O60687 465 aaPredicted RBP13.95□□□□□ -0.18
CBX3-202ENST00000396386 COQ9O75208 318 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 CTSBP07858 339 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 ADORA3P0DMS8 318 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 PIPP12273 146 aaPredicted RBP13.95□□□□□ -0.18
CBX3-202ENST00000396386 RNH1P13489 461 aaKnown RBP13.95□□□□□ -0.18
CBX3-202ENST00000396386 MLLT3P42568 568 aaPredicted RBP13.95□□□□□ -0.18
CBX3-202ENST00000396386 ST3GAL4Q11206 333 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 ZNF155Q12901 538 aaPredicted RBP13.95□□□□□ -0.18
CBX3-202ENST00000396386 DUSP8Q13202 625 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 ENTPD8Q5MY95 495 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 CLIP4Q8N3C7 705 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 GNPDA2Q8TDQ7 276 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 DOK4Q8TEW6 326 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 TRUB1Q8WWH5 349 aaKnown RBP13.95□□□□□ -0.18
CBX3-202ENST00000396386 SPACA7Q96KW9 195 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 HSPA12BQ96MM6 686 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 IL4I1Q96RQ9 567 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 MCHR1Q99705 422 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 MAP3K3Q99759 626 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 PLGRKTQ9HBL7 147 aa13.95□□□□□ -0.18
CBX3-202ENST00000396386 TTC28Q96AY4 2481 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 A0A087WUU8 490 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 AGAP5A6NIR3 686 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 CLDN24A6NM45 220 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 KIAA0513O60268 411 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 OR10H2O60403 315 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 STX11O75558 287 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 CLPXO76031 633 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 OR5F1O95221 314 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 CT62P0C5K7 136 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 SLC35E2P0CK97 266 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 CD36P16671 472 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 TNNI3P19429 210 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 RPS4Y1P22090 263 aaKnown RBP13.94□□□□□ -0.18
CBX3-202ENST00000396386 TRHRP34981 398 aaPredicted RBP13.94□□□□□ -0.18
CBX3-202ENST00000396386 PPM1FP49593 454 aaPredicted RBP13.94□□□□□ -0.18
CBX3-202ENST00000396386 ENTPD1P49961 510 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 NXPH1P58417 271 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 HNRNPKP61978 463 aaKnown RBP eCLIP13.94□□□□□ -0.18
CBX3-202ENST00000396386 EEF1A1P68104 462 aaKnown RBP13.94□□□□□ -0.18
CBX3-202ENST00000396386 MGAT2Q10469 447 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 IRF3Q14653 427 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 EXOSC7Q15024 291 aaKnown RBP13.94□□□□□ -0.18
CBX3-202ENST00000396386 TIGD6Q17RP2 521 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 CCNJQ5T5M9 372 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 ZNF730Q6ZMV8 503 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms