RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 C19orf53Q9UNZ5 99 aaPredicted RBP16.64■□□□□ 0.25
FXN-203ENST00000396366 OR10H1Q9Y4A9 318 aa16.64■□□□□ 0.25
FXN-203ENST00000396366 WIF1Q9Y5W5 379 aa16.64■□□□□ 0.25
FXN-203ENST00000396366 HIVEP1P15822 2718 aa16.64■□□□□ 0.25
FXN-203ENST00000396366 DOCK7Q96N67 2140 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 A0A087WV62 115 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 TMEM233B4DJY2 109 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 H3BQF6 201 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 SYT5O00445 386 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 AZIN1O14977 448 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 ACTL6AO96019 429 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 LINC00032P0C843 101 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 KRT20P35900 424 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 VSNL1P62760 191 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 GAB1Q13480 694 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 ZNF551Q7Z340 670 aaPredicted RBP16.63■□□□□ 0.25
FXN-203ENST00000396366 TMEM200AQ86VY9 491 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 ZZZ3Q8IYH5 903 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 BANPQ8N9N5 519 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 C9orf106Q8NAJ2 232 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 CIDECQ96AQ7 238 aaPredicted RBP16.63■□□□□ 0.25
FXN-203ENST00000396366 ELP4Q96EB1 424 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 SH3GL2Q99962 352 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 TUBA1CQ9BQE3 449 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 MECRQ9BV79 373 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 RTN4RQ9BZR6 473 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 STMN4Q9H169 189 aaPredicted RBP16.63■□□□□ 0.25
FXN-203ENST00000396366 LRTM1Q9HBL6 345 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 TAS2R10Q9NYW0 307 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 SLC17A7Q9P2U7 560 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 BAIAP2L1Q9UHR4 511 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 PCNX3Q9H6A9 2034 aa16.63■□□□□ 0.25
FXN-203ENST00000396366 HRNRQ86YZ3 2850 aaPredicted RBP16.63■□□□□ 0.25
FXN-203ENST00000396366 CD8B2A6NJW9 211 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 SLC28A1O00337 649 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 PLOD2O00469 737 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 DVL2O14641 736 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 AKAP10O43572 662 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 ZIC3O60481 467 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 TRIM13O60858 407 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 ABCB7O75027 752 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 SPAG7O75391 227 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 IL2RAP01589 272 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 CHRNGP07510 517 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 PRPH2P23942 346 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 GRK2P25098 689 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 ALDH3A1P30838 453 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 GFRA1P56159 465 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 EFR3AQ14156 821 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 RFTN2Q52LD8 501 aaPredicted RBP16.62■□□□□ 0.25
FXN-203ENST00000396366 CES4AQ5XG92 561 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 TRABD2AQ86V40 505 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 OR2L13Q8N349 312 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 CLHC1Q8NHS4 586 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 FAM111AQ96PZ2 611 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 G6PC3Q9BUM1 346 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 CALHM2Q9HA72 323 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 C1orf109Q9NX04 203 aa16.62■□□□□ 0.25
FXN-203ENST00000396366 RPH3AQ9Y2J0 694 aaPredicted RBP16.62■□□□□ 0.25
FXN-203ENST00000396366 MBD3L4A6NDZ8 208 aaPredicted RBP16.61■□□□□ 0.25
FXN-203ENST00000396366 MBD3L3A6NE82 208 aaPredicted RBP16.61■□□□□ 0.25
FXN-203ENST00000396366 MBD3L5A6NJ08 208 aaPredicted RBP16.61■□□□□ 0.25
FXN-203ENST00000396366 RGS14O43566 566 aa16.61■□□□□ 0.25
FXN-203ENST00000396366 SCO2O43819 266 aa16.61■□□□□ 0.25
FXN-203ENST00000396366 COQ9O75208 318 aa16.61■□□□□ 0.25
FXN-203ENST00000396366 PSMG1O95456 288 aa16.61■□□□□ 0.25
FXN-203ENST00000396366 CPN1P15169 458 aa16.61■□□□□ 0.25
FXN-203ENST00000396366 SDC1P18827 310 aa16.61■□□□□ 0.25
FXN-203ENST00000396366 NTSP30990 170 aa16.61■□□□□ 0.25
FXN-203ENST00000396366 FOXF2Q12947 444 aa16.61■□□□□ 0.25
FXN-203ENST00000396366 ZNF385BQ569K4 471 aa16.61■□□□□ 0.25
FXN-203ENST00000396366 KANK2Q63ZY3 851 aa16.61■□□□□ 0.25
FXN-203ENST00000396366 IKBIPQ70UQ0 350 aa16.61■□□□□ 0.25
FXN-203ENST00000396366 IFNEQ86WN2 208 aa16.61■□□□□ 0.25
FXN-203ENST00000396366 MBD3L2Q8NHZ7 208 aaPredicted RBP16.61■□□□□ 0.25
FXN-203ENST00000396366 ZPLD1Q8TCW7 415 aa16.61■□□□□ 0.25
FXN-203ENST00000396366 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.61■□□□□ 0.253e-9■■■■■ 80.2
FXN-203ENST00000396366 APOPT1Q96IL0 206 aa16.61■□□□□ 0.25
FXN-203ENST00000396366 DSN1Q9H410 356 aa16.61■□□□□ 0.25
FXN-203ENST00000396366 DDX18Q9NVP1 670 aaKnown RBP16.61■□□□□ 0.25
FXN-203ENST00000396366 CRIM1Q9NZV1 1036 aa16.61■□□□□ 0.25
FXN-203ENST00000396366 ZNF629Q9UEG4 869 aaPredicted RBP16.61■□□□□ 0.25
FXN-203ENST00000396366 GIMAP2Q9UG22 337 aa16.61■□□□□ 0.25
FXN-203ENST00000396366 CBLCQ9ULV8 474 aa16.61■□□□□ 0.25
FXN-203ENST00000396366 WBP11Q9Y2W2 641 aaKnown RBP16.61■□□□□ 0.25
FXN-203ENST00000396366 DNAJC15Q9Y5T4 150 aa16.61■□□□□ 0.25
FXN-203ENST00000396366 F8P00451 2351 aa16.61■□□□□ 0.25
FXN-203ENST00000396366 GXYLT2A0PJZ3 443 aa16.6■□□□□ 0.25
FXN-203ENST00000396366 NPIPB8E9PQR5 432 aa16.6■□□□□ 0.25
FXN-203ENST00000396366 H0Y3Z8 333 aa16.6■□□□□ 0.25
FXN-203ENST00000396366 FADS1O60427 444 aa16.6■□□□□ 0.25
FXN-203ENST00000396366 ZWINTO95229 277 aa16.6■□□□□ 0.25
FXN-203ENST00000396366 CREB1P16220 341 aa16.6■□□□□ 0.25
FXN-203ENST00000396366 SRD5A2P31213 254 aa16.6■□□□□ 0.25
FXN-203ENST00000396366 KIR2DL3P43628 341 aa16.6■□□□□ 0.25
FXN-203ENST00000396366 RFX3P48380 749 aa16.6■□□□□ 0.25
FXN-203ENST00000396366 LHX2P50458 406 aa16.6■□□□□ 0.25
FXN-203ENST00000396366 ASCL1P50553 236 aa16.6■□□□□ 0.25
FXN-203ENST00000396366 HSPB3Q12988 150 aa16.6■□□□□ 0.25
FXN-203ENST00000396366 SF3B4Q15427 424 aaKnown RBP eCLIP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms