RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 WDR53Q7Z5U6 358 aaPredicted RBP19.65■□□□□ 0.74
FXN-202ENST00000396364 ARPINQ7Z6K5 226 aa19.65■□□□□ 0.74
FXN-202ENST00000396364 RETREG3Q86VR2 466 aa19.65■□□□□ 0.74
FXN-202ENST00000396364 TREML1Q86YW5 311 aa19.65■□□□□ 0.74
FXN-202ENST00000396364 TMEM178AQ8NBL3 297 aa19.65■□□□□ 0.74
FXN-202ENST00000396364 FAM13CQ8NE31 585 aa19.65■□□□□ 0.74
FXN-202ENST00000396364 TMBIM1Q969X1 311 aa19.65■□□□□ 0.74
FXN-202ENST00000396364 RCN3Q96D15 328 aa19.65■□□□□ 0.74
FXN-202ENST00000396364 COL21A1Q96P44 957 aa19.65■□□□□ 0.74
FXN-202ENST00000396364 SECISBP2Q96T21 854 aaKnown RBP19.65■□□□□ 0.74
FXN-202ENST00000396364 CGREF1Q99674 301 aa19.65■□□□□ 0.74
FXN-202ENST00000396364 IL1RL2Q9HB29 575 aa19.65■□□□□ 0.74
FXN-202ENST00000396364 PLA2G3Q9NZ20 509 aa19.65■□□□□ 0.74
FXN-202ENST00000396364 TAGLN3Q9UI15 199 aa19.65■□□□□ 0.74
FXN-202ENST00000396364 LIPT1Q9Y234 373 aa19.65■□□□□ 0.74
FXN-202ENST00000396364 GMEB1Q9Y692 573 aa19.65■□□□□ 0.74
FXN-202ENST00000396364 AIM2O14862 343 aa19.64■□□□□ 0.73
FXN-202ENST00000396364 TNFSF10P50591 281 aa19.64■□□□□ 0.73
FXN-202ENST00000396364 RPS26P62854 115 aaKnown RBP19.64■□□□□ 0.73
FXN-202ENST00000396364 TNFAIP8L2Q6P589 184 aaPredicted RBP19.64■□□□□ 0.73
FXN-202ENST00000396364 DLEU7Q6UYE1 221 aa19.64■□□□□ 0.73
FXN-202ENST00000396364 PRR22Q8IZ63 422 aa19.64■□□□□ 0.73
FXN-202ENST00000396364 FITM2Q8N6M3 262 aa19.64■□□□□ 0.73
FXN-202ENST00000396364 PNPT1Q8TCS8 783 aaKnown RBP19.64■□□□□ 0.73
FXN-202ENST00000396364 XAGE5Q8WWM1 108 aa19.64■□□□□ 0.73
FXN-202ENST00000396364 DIO2Q92813 273 aa19.64■□□□□ 0.73
FXN-202ENST00000396364 CDS1Q92903 461 aa19.64■□□□□ 0.73
FXN-202ENST00000396364 LRRC58Q96CX6 371 aa19.64■□□□□ 0.73
FXN-202ENST00000396364 RMND5BQ96G75 393 aaPredicted RBP19.64■□□□□ 0.73
FXN-202ENST00000396364 SLC35A4Q96G79 324 aa19.64■□□□□ 0.73
FXN-202ENST00000396364 ANKRD27Q96NW4 1050 aa19.64■□□□□ 0.73
FXN-202ENST00000396364 THUMPD3Q9BV44 507 aaKnown RBP19.64■□□□□ 0.73
FXN-202ENST00000396364 ZBTB20Q9HC78 741 aaPredicted RBP19.64■□□□□ 0.73
FXN-202ENST00000396364 ZNF71Q9NQZ8 489 aaPredicted RBP19.64■□□□□ 0.73
FXN-202ENST00000396364 SLC6A13Q9NSD5 602 aa19.64■□□□□ 0.73
FXN-202ENST00000396364 NDE1Q9NXR1 346 aa19.64■□□□□ 0.73
FXN-202ENST00000396364 ANKRD10Q9NXR5 420 aa19.64■□□□□ 0.73
FXN-202ENST00000396364 CNIH4Q9P003 139 aa19.64■□□□□ 0.73
FXN-202ENST00000396364 VAPAQ9P0L0 249 aa19.64■□□□□ 0.73
FXN-202ENST00000396364 SLAMF8Q9P0V8 285 aa19.64■□□□□ 0.73
FXN-202ENST00000396364 MAP10Q9P2G4 905 aa19.64■□□□□ 0.73
FXN-202ENST00000396364 AP3M1Q9Y2T2 418 aa19.64■□□□□ 0.73
FXN-202ENST00000396364 PCDHGB6Q9Y5F9 930 aa19.64■□□□□ 0.73
FXN-202ENST00000396364 MGAQ8IWI9 3026 aa19.64■□□□□ 0.73
FXN-202ENST00000396364 NME6O75414 186 aaPredicted RBP19.63■□□□□ 0.73
FXN-202ENST00000396364 SLC25A12O75746 678 aa19.63■□□□□ 0.73
FXN-202ENST00000396364 IL33O95760 270 aa19.63■□□□□ 0.73
FXN-202ENST00000396364 P04436 131 aa19.63■□□□□ 0.73
FXN-202ENST00000396364 CD1EP15812 388 aa19.63■□□□□ 0.73
FXN-202ENST00000396364 RFX3P48380 749 aa19.63■□□□□ 0.73
FXN-202ENST00000396364 MAN2A2P49641 1150 aa19.63■□□□□ 0.73
FXN-202ENST00000396364 CLK3P49761 638 aaKnown RBP19.63■□□□□ 0.73
FXN-202ENST00000396364 ZNF791Q3KP31 576 aaPredicted RBP19.63■□□□□ 0.73
FXN-202ENST00000396364 GTDC1Q4AE62 458 aa19.63■□□□□ 0.73
FXN-202ENST00000396364 RUNDC3AQ59EK9 446 aa19.63■□□□□ 0.73
FXN-202ENST00000396364 TBCELQ5QJ74 424 aa19.63■□□□□ 0.73
FXN-202ENST00000396364 EXOSC6Q5RKV6 272 aaKnown RBP19.63■□□□□ 0.73
FXN-202ENST00000396364 SLC22A10Q63ZE4 541 aa19.63■□□□□ 0.73
FXN-202ENST00000396364 TRPM8Q7Z2W7 1104 aa19.63■□□□□ 0.73
FXN-202ENST00000396364 BCORP1Q8N888 145 aa19.63■□□□□ 0.73
FXN-202ENST00000396364 TEX19Q8NA77 164 aa19.63■□□□□ 0.73
FXN-202ENST00000396364 FAM98AQ8NCA5 519 aaKnown RBP19.63■□□□□ 0.73
FXN-202ENST00000396364 OR8J3Q8NGG0 315 aa19.63■□□□□ 0.73
FXN-202ENST00000396364 OR5D16Q8NGK9 328 aa19.63■□□□□ 0.73
FXN-202ENST00000396364 PIK3R3Q92569 461 aa19.63■□□□□ 0.73
FXN-202ENST00000396364 HOPXQ9BPY8 73 aaPredicted RBP19.63■□□□□ 0.73
FXN-202ENST00000396364 HHATLQ9HCP6 504 aa19.63■□□□□ 0.73
FXN-202ENST00000396364 SLC25A37Q9NYZ2 338 aa19.63■□□□□ 0.73
FXN-202ENST00000396364 P2RX2Q9UBL9 471 aa19.63■□□□□ 0.73
FXN-202ENST00000396364 B3GNT3Q9Y2A9 372 aa19.63■□□□□ 0.73
FXN-202ENST00000396364 KLF13Q9Y2Y9 288 aaPredicted RBP19.63■□□□□ 0.73
FXN-202ENST00000396364 TNRC6AQ8NDV7 1962 aaKnown RBP19.63■□□□□ 0.73
FXN-202ENST00000396364 TRBV5-3A0A0A0MS03 114 aa19.62■□□□□ 0.73
FXN-202ENST00000396364 F10P00742 488 aa19.62■□□□□ 0.73
FXN-202ENST00000396364 OR12D1P0DN82 309 aa19.62■□□□□ 0.73
FXN-202ENST00000396364 ESRRAP11474 423 aaPredicted RBP19.62■□□□□ 0.73
FXN-202ENST00000396364 HOXB9P17482 250 aaPredicted RBP19.62■□□□□ 0.73
FXN-202ENST00000396364 NUDT2P50583 147 aa19.62■□□□□ 0.73
FXN-202ENST00000396364 DSTNP60981 165 aa19.62■□□□□ 0.73
FXN-202ENST00000396364 ZNF169Q14929 603 aaPredicted RBP19.62■□□□□ 0.73
FXN-202ENST00000396364 RGNQ15493 299 aa19.62■□□□□ 0.73
FXN-202ENST00000396364 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.62■□□□□ 0.73
FXN-202ENST00000396364 DCST2Q5T1A1 773 aa19.62■□□□□ 0.73
FXN-202ENST00000396364 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.62■□□□□ 0.73
FXN-202ENST00000396364 HACD2Q6Y1H2 254 aa19.62■□□□□ 0.73
FXN-202ENST00000396364 EXD3Q8N9H8 876 aa19.62■□□□□ 0.73
FXN-202ENST00000396364 OR4N2Q8NGD1 307 aa19.62■□□□□ 0.73
FXN-202ENST00000396364 AURKBQ96GD4 344 aaPredicted RBP19.62■□□□□ 0.73
FXN-202ENST00000396364 ADOQ96SZ5 270 aa19.62■□□□□ 0.73
FXN-202ENST00000396364 POLE3Q9NRF9 147 aa19.62■□□□□ 0.73
FXN-202ENST00000396364 SACM1LQ9NTJ5 587 aa19.62■□□□□ 0.73
FXN-202ENST00000396364 CALML5Q9NZT1 146 aa19.62■□□□□ 0.73
FXN-202ENST00000396364 CACNA1BQ00975 2339 aa19.61■□□□□ 0.73
FXN-202ENST00000396364 KLRC4-KLRK1H3BQV0 150 aa19.61■□□□□ 0.73
FXN-202ENST00000396364 ATXN7O15265 892 aaPredicted RBP19.61■□□□□ 0.73
FXN-202ENST00000396364 TSPAN2O60636 221 aa19.61■□□□□ 0.73
FXN-202ENST00000396364 STX11O75558 287 aa19.61■□□□□ 0.73
FXN-202ENST00000396364 KCNK2O95069 426 aa19.61■□□□□ 0.73
FXN-202ENST00000396364 UNC5CO95185 931 aa19.61■□□□□ 0.73
FXN-202ENST00000396364 GPX2P18283 190 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms