RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 ARF3P61204 181 aaPredicted RBP17.4■□□□□ 0.38
SIL1-202ENST00000394817 ST3GAL3Q11203 375 aa17.4■□□□□ 0.38
SIL1-202ENST00000394817 INAQ16352 499 aa17.4■□□□□ 0.38
SIL1-202ENST00000394817 TIMM50Q3ZCQ8 353 aa17.4■□□□□ 0.38
SIL1-202ENST00000394817 ZNF404Q494X3 552 aa17.4■□□□□ 0.38
SIL1-202ENST00000394817 OR52P1PQ8NH57 321 aa17.4■□□□□ 0.38
SIL1-202ENST00000394817 CDS1Q92903 461 aa17.4■□□□□ 0.38
SIL1-202ENST00000394817 TMEM80Q96HE8 168 aa17.4■□□□□ 0.38
SIL1-202ENST00000394817 KLHL25Q9H0H3 589 aa17.4■□□□□ 0.38
SIL1-202ENST00000394817 RACGAP1Q9H0H5 632 aa17.4■□□□□ 0.38
SIL1-202ENST00000394817 TMEM74BQ9NUR3 256 aa17.4■□□□□ 0.38
SIL1-202ENST00000394817 TVP23BQ9NYZ1 205 aa17.4■□□□□ 0.38
SIL1-202ENST00000394817 KIR2DS5A0A0G2JLQ3 304 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 A0A0G2JNG1 304 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 A0A0J9YY10 115 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 KIR2DS3K7RE56 304 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 CCRL2O00421 344 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 FRS3O43559 492 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 PRKYO43930 277 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 FCMRO60667 390 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 DNAJB6O75190 326 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 OCM2P0CE71 109 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 OCMP0CE72 109 aaPredicted RBP17.39■□□□□ 0.37
SIL1-202ENST00000394817 PORP16435 677 aaPredicted RBP17.39■□□□□ 0.37
SIL1-202ENST00000394817 GIPRP48546 466 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 CCR5P51681 352 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 SMSP52788 366 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 EFNB1P98172 346 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 ATP1A4Q13733 1029 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 GINS1Q14691 196 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 KIR2DS5Q14953 304 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 ARHGAP11BQ3KRB8 267 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 ZNF628Q5EBL2 1059 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 ATCAYQ86WG3 371 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 KIF18BQ86Y91 864 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 GNPDA2Q8TDQ7 276 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 FGF11Q92914 225 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 HLA-CQ95604 372 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 MSANTD3Q96H12 275 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 CDX2Q99626 313 aaPredicted RBP17.39■□□□□ 0.37
SIL1-202ENST00000394817 TSSK6Q9BXA6 273 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 NXF2Q9GZY0 626 aaKnown RBP17.39■□□□□ 0.37
SIL1-202ENST00000394817 TCEAL2Q9H3H9 227 aaPredicted RBP17.39■□□□□ 0.37
SIL1-202ENST00000394817 ARMC7Q9H6L4 198 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 SEMA4GQ9NTN9 838 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 ZNF443Q9Y2A4 671 aaPredicted RBP17.39■□□□□ 0.37
SIL1-202ENST00000394817 MRPS2Q9Y399 296 aaKnown RBP17.39■□□□□ 0.37
SIL1-202ENST00000394817 LOC100506127A0A0U1RQW1 187 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 CPSF4LA6NMK7 179 aaKnown RBP17.39■□□□□ 0.37
SIL1-202ENST00000394817 OR5K4A6NMS3 321 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 CHRNB1P11230 501 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 PVRP15151 417 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 IFNA8P32881 189 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 DOC2BQ14184 412 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 TSTQ16762 297 aaKnown RBP17.39■□□□□ 0.37
SIL1-202ENST00000394817 SYT14P1Q58G82 188 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 MANEAQ5SRI9 462 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 FHL5Q5TD97 284 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 PTCRAQ6ISU1 281 aaPredicted RBP17.39■□□□□ 0.37
SIL1-202ENST00000394817 ACSM5Q6NUN0 579 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 OR4N5Q8IXE1 308 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 ZNF655Q8N720 491 aaPredicted RBP17.39■□□□□ 0.37
SIL1-202ENST00000394817 AMER2Q8N7J2 671 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 SLC37A2Q8TED4 501 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 SLC9A6Q92581 669 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 OPALINQ96PE5 141 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 CENPOQ9BU64 300 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 PRR14Q9BWN1 585 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 MTHFD2LQ9H903 347 aaPredicted RBP17.39■□□□□ 0.37
SIL1-202ENST00000394817 RHBDL2Q9NX52 303 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 MKLN1Q9UL63 735 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 WDR45Q9Y484 360 aa17.39■□□□□ 0.37
SIL1-202ENST00000394817 TDRD6O60522 2096 aaKnown RBP17.38■□□□□ 0.37
SIL1-202ENST00000394817 ZNF860A6NHJ4 632 aa17.38■□□□□ 0.37
SIL1-202ENST00000394817 FAM170BA6NMN3 283 aa17.38■□□□□ 0.37
SIL1-202ENST00000394817 SCG5P05408 212 aa17.38■□□□□ 0.37
SIL1-202ENST00000394817 CCNYL3P0C7X3 344 aa17.38■□□□□ 0.37
SIL1-202ENST00000394817 IL9P15248 144 aa17.38■□□□□ 0.37
SIL1-202ENST00000394817 TRHRP34981 398 aaPredicted RBP17.38■□□□□ 0.37
SIL1-202ENST00000394817 AVPR1BP47901 424 aa17.38■□□□□ 0.37
SIL1-202ENST00000394817 RGS8P57771 180 aaPredicted RBP17.38■□□□□ 0.37
SIL1-202ENST00000394817 TSPAN31Q12999 210 aa17.38■□□□□ 0.37
SIL1-202ENST00000394817 EIF2B5Q13144 721 aaKnown RBP17.38■□□□□ 0.37
SIL1-202ENST00000394817 SSX1Q16384 188 aa17.38■□□□□ 0.37
SIL1-202ENST00000394817 DUSP5Q16690 384 aa17.38■□□□□ 0.37
SIL1-202ENST00000394817 PUS10Q3MIT2 529 aaKnown RBP17.38■□□□□ 0.37
SIL1-202ENST00000394817 EXOSC6Q5RKV6 272 aaKnown RBP17.38■□□□□ 0.37
SIL1-202ENST00000394817 KIAA0895LQ68EN5 471 aa17.38■□□□□ 0.37
SIL1-202ENST00000394817 TYW3Q6IPR3 259 aaKnown RBP17.38■□□□□ 0.37
SIL1-202ENST00000394817 MRGPREQ86SM8 312 aa17.38■□□□□ 0.37
SIL1-202ENST00000394817 CLIP4Q8N3C7 705 aa17.38■□□□□ 0.37
SIL1-202ENST00000394817 SIMC1Q8NDZ2 872 aa17.38■□□□□ 0.37
SIL1-202ENST00000394817 CHCHD6Q9BRQ6 235 aa17.38■□□□□ 0.37
SIL1-202ENST00000394817 MND1Q9BWT6 205 aa17.38■□□□□ 0.37
SIL1-202ENST00000394817 PLA2G12AQ9BZM1 189 aa17.38■□□□□ 0.37
SIL1-202ENST00000394817 IL21RQ9HBE5 538 aa17.38■□□□□ 0.37
SIL1-202ENST00000394817 GPR27Q9NS67 375 aa17.38■□□□□ 0.37
SIL1-202ENST00000394817 C19orf53Q9UNZ5 99 aaPredicted RBP17.38■□□□□ 0.37
SIL1-202ENST00000394817 SPACA6W5XKT8 324 aa17.38■□□□□ 0.37
SIL1-202ENST00000394817 ARHGAP33O14559 1287 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms