RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 ZNF793Q6ZN11 406 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 ADGRD2Q7Z7M1 963 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 PPP1R16AQ96I34 528 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 PRAP1Q96NZ9 151 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 MAPKAP1Q9BPZ7 522 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 NLNQ9BYT8 704 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 CLEC4MQ9H2X3 399 aaPredicted RBP14.61□□□□□ -0.07
PTBP1-204ENST00000394601 NT5DC2Q9H857 520 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 MBNL1Q9NR56 388 aaKnown RBP14.61□□□□□ -0.07
PTBP1-204ENST00000394601 TMCC3Q9ULS5 477 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 SSR3Q9UNL2 185 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 SPIN1Q9Y657 262 aaPredicted RBP14.61□□□□□ -0.07
PTBP1-204ENST00000394601 CASKO14936 926 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 PLA2G10O15496 165 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 SH3BP5O60239 455 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 SLC22A5O76082 557 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 IFNA14P01570 189 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 CTBP2P56545 445 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 FUT5Q11128 374 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 MLC1Q15049 377 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 FBXO43Q4G163 708 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 CRTC2Q53ET0 693 aaPredicted RBP14.61□□□□□ -0.07
PTBP1-204ENST00000394601 C17orf64Q86WR6 236 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 KRT73Q86Y46 540 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 DDX31Q9H8H2 851 aaKnown RBP14.61□□□□□ -0.07
PTBP1-204ENST00000394601 TBC1D17Q9HA65 648 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 TAS2R7Q9NYW3 318 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 CNOT2Q9NZN8 540 aaKnown RBP14.61□□□□□ -0.07
PTBP1-204ENST00000394601 NPAP1Q9NZP6 1156 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 A4GNTQ9UNA3 340 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 KLK4Q9Y5K2 254 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 SH3D21A4FU49 640 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 IGLON5A6NGN9 336 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 GTPBP1O00178 669 aaKnown RBP14.6□□□□□ -0.07
PTBP1-204ENST00000394601 ALAS2P22557 587 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 MAP2K6P52564 334 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 VSX2P58304 361 aaPredicted RBP14.6□□□□□ -0.07
PTBP1-204ENST00000394601 CSNK1G2P78368 415 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 FGL2Q14314 439 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 TMEM201Q5SNT2 666 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 AGBL4Q5VU57 503 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 C12orf73Q69YU5 71 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 FAM122CQ6P4D5 195 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 TMEM65Q6PI78 240 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 USP30Q70CQ3 517 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 ZNF680Q8NEM1 530 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 UPRTQ96BW1 309 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 TEX101Q9BY14 249 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 MED28Q9H204 178 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 MAN2C1Q9NTJ4 1040 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 DEC1Q9P2X7 70 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 CHURC1-FNTBB4DL54 471 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 HPGDSO60760 199 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 PIPP12273 146 aaPredicted RBP14.6□□□□□ -0.07
PTBP1-204ENST00000394601 MYOGP15173 224 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 CTRB1P17538 263 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 SNRPGP62308 76 aaKnown RBP14.6□□□□□ -0.07
PTBP1-204ENST00000394601 LSM11P83369 360 aaKnown RBP eCLIP14.6□□□□□ -0.079e-7■■■□□ 17.3
PTBP1-204ENST00000394601 EFNB1P98172 346 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 CSTF1Q05048 431 aaKnown RBP14.6□□□□□ -0.07
PTBP1-204ENST00000394601 ILKQ13418 452 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 INSL4Q14641 139 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 CTRB2Q6GPI1 263 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 LAMTOR1Q6IAA8 161 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 KIAA1324Q6UXG2 1013 aaKnown RBP14.6□□□□□ -0.07
PTBP1-204ENST00000394601 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.6□□□□□ -0.075e-8■■□□□ 13.6
PTBP1-204ENST00000394601 CPNE7Q9UBL6 633 aa14.6□□□□□ -0.07
PTBP1-204ENST00000394601 HOXB3P14651 431 aaPredicted RBP14.59□□□□□ -0.07
PTBP1-204ENST00000394601 ARSBP15848 533 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 PTNP21246 168 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 MANFP55145 182 aaKnown RBP14.59□□□□□ -0.07
PTBP1-204ENST00000394601 OLR1P78380 273 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 PGBD2Q6P3X8 592 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 IL20RBQ6UXL0 311 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 RASSF6Q6ZTQ3 369 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 LRRTM4Q86VH4 590 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 SMPDL3AQ92484 453 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 MVB12BQ9H7P6 319 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 SERGEFQ9UGK8 458 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 MDC1Q14676 2089 aaKnown RBP14.59□□□□□ -0.07
PTBP1-204ENST00000394601 ENTPD6O75354 484 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 PCCBP05166 539 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 CCR8P51685 355 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 HSPB3Q12988 150 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 AGERQ15109 404 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 SYPL1Q16563 259 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 PLAG1Q6DJT9 500 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 ZNF767PQ75MW2 155 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 KANSL1Q7Z3B3 1105 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 LRRC17Q8N6Y2 441 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 SLC7A13Q8TCU3 470 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 BADQ92934 168 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 ZNF354BQ96LW1 612 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 OPALINQ96PE5 141 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 TREX2Q9BQ50 279 aaPredicted RBP14.59□□□□□ -0.07
PTBP1-204ENST00000394601 RBCK1Q9BYM8 510 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 NEUROD4Q9HD90 331 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 POLMQ9NP87 494 aaPredicted RBP14.59□□□□□ -0.07
PTBP1-204ENST00000394601 A0A1W2PRG6 482 aa14.59□□□□□ -0.07
PTBP1-204ENST00000394601 SYNDIG1LA6NDD5 238 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms