RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 MAP4K5Q9Y4K4 846 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 PCDHGA2Q9Y5H1 932 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 TET1Q8NFU7 2136 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 A0A1B0GVI7 797 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 CLIC1O00299 241 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 EEF1E1O43324 174 aaKnown RBP5.38□□□□□ -1.55
RFFL-202ENST00000394597 B3GALT2O43825 422 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 SLC28A2O43868 658 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 UGDHO60701 494 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 RAF1P04049 648 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 ASGR2P07307 311 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 CISD3P0C7P0 127 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 PDHA2P29803 388 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 PRDX3P30048 256 aaKnown RBP5.38□□□□□ -1.55
RFFL-202ENST00000394597 RABIFP47224 123 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 HTR6P50406 440 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 ISL1P61371 349 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 TDGQ13569 410 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 KEAP1Q14145 624 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 FCN2Q15485 313 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 RFTN2Q52LD8 501 aaPredicted RBP5.38□□□□□ -1.55
RFFL-202ENST00000394597 PRRT3Q5FWE3 981 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 HLA-DQA1Q5Y7H0 255 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 RAB11FIP2Q7L804 512 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 ZSCAN1Q8NBB4 408 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 CAMKVQ8NCB2 501 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 OR6M1Q8NGM8 313 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 XAGE5Q8WWM1 108 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 ECHDC3Q96DC8 303 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 OR51J1Q9H342 316 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 SDR39U1Q9NRG7 319 aaPredicted RBP5.38□□□□□ -1.55
RFFL-202ENST00000394597 FAM120CQ9NX05 1096 aaKnown RBP5.38□□□□□ -1.55
RFFL-202ENST00000394597 OSGIN1Q9UJX0 560 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 A0A0G2JN53 185 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 B4DXG7 233 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 F8W036 122 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 PRAMEF26H0Y7S4 382 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 E2F3O00716 465 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 ERI3O43414 337 aaKnown RBP5.38□□□□□ -1.55
RFFL-202ENST00000394597 C1QAP02745 245 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 ALDOBP05062 364 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 CD2P06729 351 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 ALPPL2P10696 532 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 HLA-DMAP28067 261 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 DHPSP49366 369 aaPredicted RBP5.38□□□□□ -1.55
RFFL-202ENST00000394597 RAB28P51157 221 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 TAS2R50P59544 299 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 ZXDBP98169 803 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 ELOCQ15369 112 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 SF3A2Q15428 464 aaKnown RBP5.38□□□□□ -1.55
RFFL-202ENST00000394597 HENMT1Q5T8I9 393 aaKnown RBP5.38□□□□□ -1.55
RFFL-202ENST00000394597 CNIH2Q6PI25 160 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 ALKAL2Q6UX46 152 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 ADAMTSL4Q6UY14 1074 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 WASH2PQ6VEQ5 465 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 LARP4Q71RC2 724 aaKnown RBP eCLIP5.38□□□□□ -1.55
RFFL-202ENST00000394597 SLC46A3Q7Z3Q1 461 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 PDZD3Q86UT5 571 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 THAP6Q8TBB0 222 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 ZCCHC10Q8TBK6 192 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 LMX1AQ8TE12 382 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 LURAP1Q96LR2 239 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 AMBRA1Q9C0C7 1298 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 SPNS1Q9H2V7 528 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 TVP23BQ9NYZ1 205 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 DNAJC27Q9NZQ0 273 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 MGAT4CQ9UBM8 478 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 GPN3Q9UHW5 284 aaPredicted RBP5.38□□□□□ -1.55
RFFL-202ENST00000394597 SARDHQ9UL12 918 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 STUB1Q9UNE7 303 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 RALGAPA2Q2PPJ7 1873 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 SIP14410 1827 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 KANTRA0A1W2PQU2 76 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 FAM170BA6NMN3 283 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 NDUFS4O43181 175 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 AKAP8O43823 692 aaKnown RBP5.38□□□□□ -1.55
RFFL-202ENST00000394597 MATN4O95460 622 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 C1orf105O95561 183 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 CD160O95971 181 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 SERPINA3P01011 423 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 EGFP01133 1207 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 H2AFB2P0C5Z0 115 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 HK3P52790 923 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 CLDN8P56748 225 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 SMIM11AP58511 58 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 B2MP61769 119 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 SLC35A2P78381 396 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 EXOSC2Q13868 293 aaKnown RBP5.38□□□□□ -1.55
RFFL-202ENST00000394597 PTGR1Q14914 329 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 OLFML2AQ68BL7 652 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 GRHL2Q6ISB3 625 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 SLC25A25Q6KCM7 469 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 PARGQ86W56 976 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 KLHDC8BQ8IXV7 354 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 SLC22A15Q8IZD6 547 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 ZNF454Q8N9F8 522 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 OR8J3Q8NGG0 315 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 OR5AR1Q8NGP9 310 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 HUS1BQ8NHY5 278 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.38□□□□□ -1.556e-7■■■■■ 54.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms