RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 ENDOUP21128 410 aaKnown RBP12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 TNFRSF4P43489 277 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 ADPRHP54922 357 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 EFNB1P98172 346 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 CDK5Q00535 292 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 FABP5Q01469 135 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 OCLNQ16625 522 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 TOR1AIP1Q5JTV8 583 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 ATAD3CQ5T2N8 411 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 C6orf183Q5T699 404 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 MEDAGQ5VYS4 303 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 FAM131AQ6UXB0 335 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 DTX3Q8N9I9 347 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 SCAIQ8N9R8 606 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 KCT2Q8NC54 265 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 OR52E1Q8NGJ3 308 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 PIK3R3Q92569 461 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 ZNF486Q96H40 463 aaPredicted RBP12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 POLDIP3Q9BY77 421 aaKnown RBP12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 ACSS1Q9NUB1 689 aaPredicted RBP12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 KLHL3Q9UH77 587 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 SSR3Q9UNL2 185 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 A0A1W2PQF6 199 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 SLC35F4A4IF30 521 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 FAM183AA6NL82 134 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 FAM170BA6NMN3 283 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 PLRG1O43660 514 aaKnown RBP12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 TBX19O60806 448 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 COQ9O75208 318 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 RAB36O95755 333 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 GNSP15586 552 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 CTHP32929 405 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 HTR3AP46098 478 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 RACK1P63244 317 aaKnown RBP12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 MLLT11Q13015 90 aaPredicted RBP12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 KIAA1161Q6NSJ0 714 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 OR6F1Q8NGZ6 308 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 OR4Q3Q8NH05 313 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 OR52P1PQ8NH57 321 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 SLC38A1Q9H2H9 487 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 ZSCAN32Q9NX65 697 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 CRNNQ9UBG3 495 aaPredicted RBP12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 DIMT1Q9UNQ2 313 aaKnown RBP12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 N6AMT1Q9Y5N5 214 aa12.64□□□□□ -0.39
GTF2F1-201ENST00000394456 LIMS3P0CW19 117 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 LIMS4P0CW20 117 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 CXCR2P25025 360 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 ATP5A1P25705 553 aaKnown RBP12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 DEFA1P59665 94 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 DEFA3P59666 94 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 GPR50Q13585 617 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 AGERQ15109 404 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 BCL2A1Q16548 175 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 ZNF791Q3KP31 576 aaPredicted RBP12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 CRTC2Q53ET0 693 aaPredicted RBP12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 ARMC4Q5T2S8 1044 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 SDE2Q6IQ49 451 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 C1orf94Q6P1W5 598 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 FAM111BQ6SJ93 734 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 TMEFF1Q8IYR6 380 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 UBQLNLQ8IYU4 475 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 COL26A1Q96A83 441 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 OR7D2Q96RA2 312 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 WBP11Q9Y2W2 641 aaKnown RBP12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 CMAHPQ9Y471 501 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 ARHGEF17Q96PE2 2063 aaPredicted RBP12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 A0A0B4J293 547 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 HRO43593 1189 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 APOA1P02647 267 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 HIST1H1TP22492 207 aaPredicted RBP12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 PDX1P52945 283 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 TAS2R41P59536 307 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 ID2Q02363 134 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 KRT33BQ14525 404 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 ARHGAP19Q14CB8 494 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 ZNF311Q5JNZ3 666 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 TYW3Q6IPR3 259 aaKnown RBP12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 ABHD17CQ6PCB6 329 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 KRT73Q86Y46 540 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 TP53INP1Q96A56 240 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 SLC25A46Q96AG3 418 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 OTULINQ96BN8 352 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 RNF31Q96EP0 1072 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 PRRC1Q96M27 445 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 RIPOR3Q96MK2 946 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 HDHD5Q9BXW7 423 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 PLSCR3Q9NRY6 295 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 ACSL5Q9ULC5 683 aa12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 SF3B6Q9Y3B4 125 aaKnown RBP12.63□□□□□ -0.39
GTF2F1-201ENST00000394456 POM121BA6NF01 834 aa12.62□□□□□ -0.39
GTF2F1-201ENST00000394456 H0Y8X5 98 aa12.62□□□□□ -0.39
GTF2F1-201ENST00000394456 CSF3P09919 207 aa12.62□□□□□ -0.39
GTF2F1-201ENST00000394456 TSPAN19P0C672 248 aa12.62□□□□□ -0.39
GTF2F1-201ENST00000394456 APEX1P27695 318 aaKnown RBP12.62□□□□□ -0.39
GTF2F1-201ENST00000394456 PPP2R1BP30154 601 aa12.62□□□□□ -0.39
GTF2F1-201ENST00000394456 NTSP30990 170 aa12.62□□□□□ -0.39
GTF2F1-201ENST00000394456 STXBP1P61764 594 aaKnown RBP12.62□□□□□ -0.39
GTF2F1-201ENST00000394456 SLC9A5Q14940 896 aa12.62□□□□□ -0.39
GTF2F1-201ENST00000394456 CCNJQ5T5M9 372 aa12.62□□□□□ -0.39
GTF2F1-201ENST00000394456 SMAP2Q8WU79 429 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms