RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 VSTM2LQ96N03 204 aa13.86□□□□□ -0.19
CHMP3-202ENST00000393773 ADOQ96SZ5 270 aa13.86□□□□□ -0.19
CHMP3-202ENST00000393773 ANKRA2Q9H9E1 313 aa13.86□□□□□ -0.19
CHMP3-202ENST00000393773 RNF122Q9H9V4 155 aa13.86□□□□□ -0.19
CHMP3-202ENST00000393773 ELOVL5Q9NYP7 299 aa13.86□□□□□ -0.19
CHMP3-202ENST00000393773 AHSPQ9NZD4 102 aa13.86□□□□□ -0.19
CHMP3-202ENST00000393773 ANK2Q01484 3957 aa13.85□□□□□ -0.19
CHMP3-202ENST00000393773 A0A096LPK6 155 aa13.85□□□□□ -0.19
CHMP3-202ENST00000393773 H0YC42 278 aa13.85□□□□□ -0.19
CHMP3-202ENST00000393773 EMC8O43402 210 aa13.85□□□□□ -0.19
CHMP3-202ENST00000393773 GUCY1B2O75343 617 aa13.85□□□□□ -0.19
CHMP3-202ENST00000393773 NME6O75414 186 aaPredicted RBP13.85□□□□□ -0.19
CHMP3-202ENST00000393773 CTAGE8P0CG41 777 aa13.85□□□□□ -0.19
CHMP3-202ENST00000393773 CD8BP10966 210 aa13.85□□□□□ -0.19
CHMP3-202ENST00000393773 PAFAH1B1P43034 410 aa13.85□□□□□ -0.19
CHMP3-202ENST00000393773 TPD52P55327 224 aaPredicted RBP13.85□□□□□ -0.19
CHMP3-202ENST00000393773 IFT88Q13099 833 aa13.85□□□□□ -0.19
CHMP3-202ENST00000393773 EFR3AQ14156 821 aa13.85□□□□□ -0.19
CHMP3-202ENST00000393773 CAPRIN1Q14444 709 aaKnown RBP13.85□□□□□ -0.19
CHMP3-202ENST00000393773 TTC19Q6DKK2 380 aaPredicted RBP13.85□□□□□ -0.19
CHMP3-202ENST00000393773 KLC3Q6P597 504 aa13.85□□□□□ -0.19
CHMP3-202ENST00000393773 CCDC25Q86WR0 208 aa13.85□□□□□ -0.19
CHMP3-202ENST00000393773 CTAGE4Q8IX94 777 aa13.85□□□□□ -0.19
CHMP3-202ENST00000393773 FADS6Q8N9I5 356 aa13.85□□□□□ -0.19
CHMP3-202ENST00000393773 FBXO25Q8TCJ0 367 aa13.85□□□□□ -0.19
CHMP3-202ENST00000393773 ZC3HAV1LQ96H79 300 aaKnown RBP13.85□□□□□ -0.19
CHMP3-202ENST00000393773 ZNF845Q96IR2 970 aaPredicted RBP13.85□□□□□ -0.19
CHMP3-202ENST00000393773 NAPGQ99747 312 aaPredicted RBP13.85□□□□□ -0.19
CHMP3-202ENST00000393773 SLC12A4Q9UP95 1085 aa13.85□□□□□ -0.19
CHMP3-202ENST00000393773 C16orf97H3BN30 126 aa13.84□□□□□ -0.19
CHMP3-202ENST00000393773 STX16-NPEPL1H3BU86 382 aa13.84□□□□□ -0.19
CHMP3-202ENST00000393773 STX16O14662 325 aa13.84□□□□□ -0.19
CHMP3-202ENST00000393773 THBDP07204 575 aa13.84□□□□□ -0.19
CHMP3-202ENST00000393773 PEPDP12955 493 aa13.84□□□□□ -0.19
CHMP3-202ENST00000393773 IL12BP29460 328 aa13.84□□□□□ -0.19
CHMP3-202ENST00000393773 MAGEA4P43358 317 aa13.84□□□□□ -0.19
CHMP3-202ENST00000393773 ALDH9A1P49189 494 aa13.84□□□□□ -0.19
CHMP3-202ENST00000393773 SERPINB8P50452 374 aa13.84□□□□□ -0.19
CHMP3-202ENST00000393773 DSCR4P56555 118 aaPredicted RBP13.84□□□□□ -0.19
CHMP3-202ENST00000393773 GUCY2DQ02846 1103 aa13.84□□□□□ -0.19
CHMP3-202ENST00000393773 ZDHHC24Q6UX98 284 aa13.84□□□□□ -0.19
CHMP3-202ENST00000393773 LARP4Q71RC2 724 aaKnown RBP eCLIP13.84□□□□□ -0.197e-6■□□□□ 9
CHMP3-202ENST00000393773 PLD6Q8N2A8 252 aaKnown RBP13.84□□□□□ -0.19
CHMP3-202ENST00000393773 OR4F6Q8NGB9 312 aa13.84□□□□□ -0.19
CHMP3-202ENST00000393773 FNDC9Q8TBE3 224 aa13.84□□□□□ -0.19
CHMP3-202ENST00000393773 ATP6V1E2Q96A05 226 aa13.84□□□□□ -0.19
CHMP3-202ENST00000393773 ERP27Q96DN0 273 aa13.84□□□□□ -0.19
CHMP3-202ENST00000393773 PHF21BQ96EK2 531 aa13.84□□□□□ -0.19
CHMP3-202ENST00000393773 SLC39A3Q9BRY0 314 aa13.84□□□□□ -0.19
CHMP3-202ENST00000393773 PINK1Q9BXM7 581 aa13.84□□□□□ -0.19
CHMP3-202ENST00000393773 ELOVL6Q9H5J4 265 aa13.84□□□□□ -0.19
CHMP3-202ENST00000393773 BRF2Q9HAW0 419 aa13.84□□□□□ -0.19
CHMP3-202ENST00000393773 ZNF701Q9NV72 531 aaPredicted RBP13.84□□□□□ -0.19
CHMP3-202ENST00000393773 ZNF175Q9Y473 711 aa13.84□□□□□ -0.19
CHMP3-202ENST00000393773 ABCA1O95477 2261 aa13.84□□□□□ -0.19
CHMP3-202ENST00000393773 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.83□□□□□ -0.2
CHMP3-202ENST00000393773 SOX30O94993 753 aa13.83□□□□□ -0.2
CHMP3-202ENST00000393773 PDYNP01213 254 aa13.83□□□□□ -0.2
CHMP3-202ENST00000393773 RPS17P08708 135 aaKnown RBP13.83□□□□□ -0.2
CHMP3-202ENST00000393773 EVI2BP34910 448 aa13.83□□□□□ -0.2
CHMP3-202ENST00000393773 SUCLG1P53597 346 aaKnown RBP13.83□□□□□ -0.2
CHMP3-202ENST00000393773 PNLIPRP2P54317 469 aa13.83□□□□□ -0.2
CHMP3-202ENST00000393773 GNG11P61952 73 aa13.83□□□□□ -0.2
CHMP3-202ENST00000393773 TRA2BP62995 288 aaKnown RBP13.83□□□□□ -0.2
CHMP3-202ENST00000393773 PSPHP78330 225 aa13.83□□□□□ -0.2
CHMP3-202ENST00000393773 SGO1Q5FBB7 561 aa13.83□□□□□ -0.2
CHMP3-202ENST00000393773 RAET1LQ5VY80 246 aa13.83□□□□□ -0.2
CHMP3-202ENST00000393773 LETMD1Q6P1Q0 360 aa13.83□□□□□ -0.2
CHMP3-202ENST00000393773 PLEKHM3Q6ZWE6 761 aa13.83□□□□□ -0.2
CHMP3-202ENST00000393773 RPS27LQ71UM5 84 aaKnown RBP13.83□□□□□ -0.2
CHMP3-202ENST00000393773 MEIOBQ8N635 442 aa13.83□□□□□ -0.2
CHMP3-202ENST00000393773 C1orf52Q8N6N3 182 aaKnown RBP13.83□□□□□ -0.2
CHMP3-202ENST00000393773 ZNF610Q8N9Z0 462 aa13.83□□□□□ -0.2
CHMP3-202ENST00000393773 OR2M3Q8NG83 312 aa13.83□□□□□ -0.2
CHMP3-202ENST00000393773 OR4K17Q8NGC6 315 aa13.83□□□□□ -0.2
CHMP3-202ENST00000393773 OR4N2Q8NGD1 307 aa13.83□□□□□ -0.2
CHMP3-202ENST00000393773 OR9A2Q8NGT5 310 aa13.83□□□□□ -0.2
CHMP3-202ENST00000393773 KAT2AQ92830 837 aa13.83□□□□□ -0.2
CHMP3-202ENST00000393773 EFHD2Q96C19 240 aaPredicted RBP13.83□□□□□ -0.2
CHMP3-202ENST00000393773 FOLH1BQ9HBA9 442 aa13.83□□□□□ -0.2
CHMP3-202ENST00000393773 PPP4R1LQ9P1A2 415 aa13.83□□□□□ -0.2
CHMP3-202ENST00000393773 UTS2RQ9UKP6 389 aa13.83□□□□□ -0.2
CHMP3-202ENST00000393773 PSME2Q9UL46 239 aa13.83□□□□□ -0.2
CHMP3-202ENST00000393773 ZNF780BQ9Y6R6 833 aa13.83□□□□□ -0.2
CHMP3-202ENST00000393773 SEC14L5O43304 696 aa13.82□□□□□ -0.2
CHMP3-202ENST00000393773 SCO2O43819 266 aa13.82□□□□□ -0.2
CHMP3-202ENST00000393773 CRLF1O75462 422 aa13.82□□□□□ -0.2
CHMP3-202ENST00000393773 TNFRSF21O75509 655 aa13.82□□□□□ -0.2
CHMP3-202ENST00000393773 BCAS2O75934 225 aaPredicted RBP13.82□□□□□ -0.2
CHMP3-202ENST00000393773 NID1P14543 1247 aa13.82□□□□□ -0.2
CHMP3-202ENST00000393773 KRT20P35900 424 aa13.82□□□□□ -0.2
CHMP3-202ENST00000393773 MAGEA12P43365 314 aa13.82□□□□□ -0.2
CHMP3-202ENST00000393773 KCNJ5P48544 419 aa13.82□□□□□ -0.2
CHMP3-202ENST00000393773 PLTPP55058 493 aa13.82□□□□□ -0.2
CHMP3-202ENST00000393773 FGFBP1Q14512 234 aa13.82□□□□□ -0.2
CHMP3-202ENST00000393773 GANABQ14697 944 aaKnown RBP13.82□□□□□ -0.2
CHMP3-202ENST00000393773 PON3Q15166 354 aa13.82□□□□□ -0.2
CHMP3-202ENST00000393773 TRADDQ15628 312 aa13.82□□□□□ -0.2
CHMP3-202ENST00000393773 ZNF704Q6ZNC4 412 aaPredicted RBP13.82□□□□□ -0.2
CHMP3-202ENST00000393773 CHMP1BQ7LBR1 199 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms