RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 PCYT1AP49585 367 aa23.92■■□□□ 1.42
SMARCD3-203ENST00000392811 VSX2P58304 361 aaPredicted RBP23.92■■□□□ 1.42
SMARCD3-203ENST00000392811 SHC2P98077 582 aa23.92■■□□□ 1.42
SMARCD3-203ENST00000392811 DOC2BQ14184 412 aa23.92■■□□□ 1.42
SMARCD3-203ENST00000392811 OCLNQ16625 522 aa23.92■■□□□ 1.42
SMARCD3-203ENST00000392811 ACSM5Q6NUN0 579 aa23.92■■□□□ 1.42
SMARCD3-203ENST00000392811 PRICKLE2Q7Z3G6 844 aa23.92■■□□□ 1.42
SMARCD3-203ENST00000392811 BTLAQ7Z6A9 289 aa23.92■■□□□ 1.42
SMARCD3-203ENST00000392811 GJD3Q8N144 294 aa23.92■■□□□ 1.42
SMARCD3-203ENST00000392811 POLDIP3Q9BY77 421 aaKnown RBP23.92■■□□□ 1.42
SMARCD3-203ENST00000392811 OR51E2Q9H255 320 aa23.92■■□□□ 1.42
SMARCD3-203ENST00000392811 IL21RQ9HBE5 538 aa23.92■■□□□ 1.42
SMARCD3-203ENST00000392811 FBXO8Q9NRD0 319 aa23.92■■□□□ 1.42
SMARCD3-203ENST00000392811 STARD5Q9NSY2 213 aa23.92■■□□□ 1.42
SMARCD3-203ENST00000392811 NTNG1Q9Y2I2 539 aa23.92■■□□□ 1.42
SMARCD3-203ENST00000392811 SPACA6W5XKT8 324 aa23.92■■□□□ 1.42
SMARCD3-203ENST00000392811 OR5K3A6NET4 321 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 CYR61O00622 381 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 HCRTR1O43613 425 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 GALR3O60755 368 aaPredicted RBP23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 TYRP1P17643 537 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 RGS8P57771 180 aaPredicted RBP23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 CDK5Q00535 292 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 HHEXQ03014 270 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 ZNF91Q05481 1191 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 ST3GAL3Q11203 375 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 MANEAQ5SRI9 462 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 MEDAGQ5VYS4 303 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 CACTIN-AS1Q8N1I8 211 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 S100ZQ8WXG8 99 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 MGLLQ99685 303 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 PLA2G12AQ9BZM1 189 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 WDR12Q9GZL7 423 aaKnown RBP23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 B3GNT3Q9Y2A9 372 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 RPL36Q9Y3U8 105 aaKnown RBP23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 PCDHGA3Q9Y5H0 932 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 FAM170BA6NMN3 283 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 TLX2O43763 284 aaPredicted RBP23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 DBTP11182 482 aaKnown RBP23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 ZNF12P17014 697 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 TUBA1BP68363 451 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 ZNF730Q6ZMV8 503 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 TUBA1AQ71U36 451 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 OOSP2Q86WS3 158 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 FAM26EQ8N5C1 309 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 GNPDA2Q8TDQ7 276 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 MSANTD3Q96H12 275 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 TSSK6Q9BXA6 273 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 EGLN3Q9H6Z9 239 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 ADAP2Q9NPF8 381 aa23.91■■□□□ 1.42
SMARCD3-203ENST00000392811 LOC100506127A0A0U1RQW1 187 aa23.9■■□□□ 1.42
SMARCD3-203ENST00000392811 ATP1B1P05026 303 aa23.9■■□□□ 1.42
SMARCD3-203ENST00000392811 IGFBP4P22692 258 aa23.9■■□□□ 1.42
SMARCD3-203ENST00000392811 CCNJQ5T5M9 372 aa23.9■■□□□ 1.42
SMARCD3-203ENST00000392811 PEX5LQ8IYB4 626 aa23.9■■□□□ 1.42
SMARCD3-203ENST00000392811 CA13Q8N1Q1 262 aa23.9■■□□□ 1.42
SMARCD3-203ENST00000392811 ABTB1Q969K4 478 aaPredicted RBP23.9■■□□□ 1.42
SMARCD3-203ENST00000392811 TMEM80Q96HE8 168 aa23.9■■□□□ 1.42
SMARCD3-203ENST00000392811 SDF2Q99470 211 aa23.9■■□□□ 1.42
SMARCD3-203ENST00000392811 PIGUQ9H490 435 aa23.9■■□□□ 1.42
SMARCD3-203ENST00000392811 A0A1W2PPC4 97 aa23.89■■□□□ 1.42
SMARCD3-203ENST00000392811 AP3D1O14617 1153 aa23.89■■□□□ 1.42
SMARCD3-203ENST00000392811 PFDN1O60925 122 aa23.89■■□□□ 1.42
SMARCD3-203ENST00000392811 GPR75O95800 540 aa23.89■■□□□ 1.42
SMARCD3-203ENST00000392811 NT5EP21589 574 aa23.89■■□□□ 1.42
SMARCD3-203ENST00000392811 CSTF2P33240 577 aaKnown RBP eCLIP23.89■■□□□ 1.42
SMARCD3-203ENST00000392811 IFNGR2P38484 337 aa23.89■■□□□ 1.42
SMARCD3-203ENST00000392811 ITGADQ13349 1161 aa23.89■■□□□ 1.42
SMARCD3-203ENST00000392811 TSTQ16762 297 aaKnown RBP23.89■■□□□ 1.42
SMARCD3-203ENST00000392811 SOWAHCQ53LP3 525 aaPredicted RBP23.89■■□□□ 1.42
SMARCD3-203ENST00000392811 ZNF836Q6ZNA1 936 aa23.89■■□□□ 1.42
SMARCD3-203ENST00000392811 PLEKHM3Q6ZWE6 761 aa23.89■■□□□ 1.42
SMARCD3-203ENST00000392811 USP43Q70EL4 1123 aa23.89■■□□□ 1.42
SMARCD3-203ENST00000392811 MFSD4AQ8N468 514 aa23.89■■□□□ 1.42
SMARCD3-203ENST00000392811 FAM160A2Q8N612 972 aaPredicted RBP23.89■■□□□ 1.42
SMARCD3-203ENST00000392811 ZDHHC1Q8WTX9 485 aa23.89■■□□□ 1.42
SMARCD3-203ENST00000392811 MCHR1Q99705 422 aa23.89■■□□□ 1.42
SMARCD3-203ENST00000392811 CCDC3Q9BQI4 270 aa23.89■■□□□ 1.42
SMARCD3-203ENST00000392811 ORAI3Q9BRQ5 295 aa23.89■■□□□ 1.42
SMARCD3-203ENST00000392811 ANKRD19PQ9H560 264 aa23.89■■□□□ 1.42
SMARCD3-203ENST00000392811 FAM60AQ9NP50 221 aa23.89■■□□□ 1.42
SMARCD3-203ENST00000392811 ERGIC3Q9Y282 383 aa23.89■■□□□ 1.42
SMARCD3-203ENST00000392811 CENPVL1A0A0U1RR11 272 aa23.89■■□□□ 1.41
SMARCD3-203ENST00000392811 BMP4P12644 408 aa23.89■■□□□ 1.41
SMARCD3-203ENST00000392811 SMSP52788 366 aa23.89■■□□□ 1.41
SMARCD3-203ENST00000392811 LIMK1P53667 647 aa23.89■■□□□ 1.41
SMARCD3-203ENST00000392811 NCF4Q15080 339 aa23.89■■□□□ 1.41
SMARCD3-203ENST00000392811 RLN3Q8WXF3 142 aa23.89■■□□□ 1.41
SMARCD3-203ENST00000392811 KLHDC7BQ96G42 594 aa23.89■■□□□ 1.41
SMARCD3-203ENST00000392811 RNF167Q9H6Y7 350 aa23.89■■□□□ 1.41
SMARCD3-203ENST00000392811 CNIH4Q9P003 139 aa23.89■■□□□ 1.41
SMARCD3-203ENST00000392811 CLEC2DQ9UHP7 191 aa23.89■■□□□ 1.41
SMARCD3-203ENST00000392811 ZNF232Q9UNY5 417 aa23.89■■□□□ 1.41
SMARCD3-203ENST00000392811 B4DGG1 531 aa23.88■■□□□ 1.41
SMARCD3-203ENST00000392811 THY1P04216 161 aa23.88■■□□□ 1.41
SMARCD3-203ENST00000392811 ST6GAL1P15907 406 aa23.88■■□□□ 1.41
SMARCD3-203ENST00000392811 IFNA8P32881 189 aa23.88■■□□□ 1.41
SMARCD3-203ENST00000392811 EFNB1P98172 346 aa23.88■■□□□ 1.41
SMARCD3-203ENST00000392811 TSPAN31Q12999 210 aa23.88■■□□□ 1.41
SMARCD3-203ENST00000392811 SYT14P1Q58G82 188 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms