RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 PROS1P07225 676 aa2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 NR2C1P13056 603 aa2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 MDKP21741 143 aaPredicted RBP2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 UGT1A3P35503 534 aa2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 MAGEA4P43358 317 aa2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 SLC26A2P50443 739 aa2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 PPP1R8Q12972 351 aaKnown RBP2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 RAB35Q15286 201 aa2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 ACSF3Q4G176 576 aaPredicted RBP2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 KHDRBS2Q5VWX1 349 aaKnown RBP2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 UFSP1Q6NVU6 142 aa2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 AMZ2Q86W34 360 aa2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 IQCA1Q86XH1 822 aa2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 MCOLN2Q8IZK6 566 aa2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 ZNF397Q8NF99 534 aaPredicted RBP2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 SLC25A38Q96DW6 304 aa2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 TM2D1Q9BX74 207 aa2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 HES7Q9BYE0 225 aa2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 Q9H3A6 140 aa2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 MEPEQ9NQ76 525 aaPredicted RBP2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 PRMT8Q9NR22 394 aaPredicted RBP2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 HOMER3Q9NSC5 361 aa2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 DCAF13Q9NV06 445 aaKnown RBP2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 ELOVL2Q9NXB9 296 aa2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 HMG20BQ9P0W2 317 aa2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 FAM153AQ9UHL3 310 aa2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 USP6P35125 1406 aa2.39□□□□□ -2.03
SNORA40.3-201ENST00000390964 A0A0U1RQG5 324 aaPredicted RBP2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 LATO43561 262 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 ZNF861PO60384 105 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 CCDC166P0CW27 439 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 RPL32P62910 135 aaKnown RBP2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 ARF5P84085 180 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 GALK2Q01415 458 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 C17orf67Q0P5P2 114 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 PKN2Q16513 984 aaKnown RBP2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 SPATA46Q5T0L3 261 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 KRTAP5-5Q701N2 237 aaPredicted RBP2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 CCDC91Q7Z6B0 441 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 GPBP1Q86WP2 473 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 TGIF2LYQ8IUE0 185 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 PEX5LQ8IYB4 626 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 CENPSQ8N2Z9 138 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 SFRP1Q8N474 314 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 RNF175Q8N4F7 328 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 LEMD2Q8NC56 503 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 ADAMTS16Q8TE57 1224 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 C18orf25Q96B23 403 aaPredicted RBP2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 DTD2Q96FN9 168 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 NDUFAF3Q9BU61 184 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 TSSK1BQ9BXA7 367 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 TEX13AQ9BXU3 409 aaPredicted RBP2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 GLT8D2Q9H1C3 349 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 CARD9Q9H257 536 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 FAM114A2Q9NRY5 505 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 EHFQ9NZC4 300 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 FKBP7Q9Y680 259 aa2.38□□□□□ -2.03
SNORA40.3-201ENST00000390964 DHX29Q7Z478 1369 aaKnown RBP2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 CHD4Q14839 1912 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 TRBV2A0A0J9YWF9 115 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 PGK1P00558 417 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 GNSP15586 552 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 NF2P35240 595 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 OR3A4PP47883 348 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 SLC6A8P48029 635 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 UCNP55089 124 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 CASP9P55211 416 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 RPS6P62753 249 aaKnown RBP2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 HERVK_113P63132 956 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 ERVK-8P63133 956 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 PSG7Q13046 419 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 BTG3Q14201 252 aaPredicted RBP2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 IL17AQ16552 155 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 CYP51A1Q16850 503 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 ZSWIM7Q19AV6 140 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 PARP6Q2NL67 630 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 CCDC14Q49A88 953 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 CYBRD1Q53TN4 286 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 WSCD1Q658N2 575 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 LEG1Q6P5S2 330 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 GOLGA7Q7Z5G4 137 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 PARGQ86W56 976 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 ERI1Q8IV48 349 aaKnown RBP2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 CSNK1A1LQ8N752 337 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 PHYHIPQ92561 330 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 ZNF560Q96MR9 790 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 CARD6Q9BX69 1037 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 ERVK-6Q9BXR3 956 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 ABCG8Q9H221 673 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 CYP39A1Q9NYL5 469 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 NDUFA13Q9P0J0 144 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 TRIM10Q9UDY6 481 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 FZR1Q9UM11 496 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 LRRK1Q38SD2 2015 aa2.37□□□□□ -2.03
SNORA40.3-201ENST00000390964 TRIM49D1C9J1S8 452 aa2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 KINO60870 393 aaKnown RBP2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 HSF2BPO75031 334 aa2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 RFC2P35250 354 aa2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 NUMBP49757 651 aa2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 HNRNPFP52597 415 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms