RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 SCARB1Q8WTV0 552 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 CNOT9Q92600 299 aaKnown RBP13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 FOXJ1Q92949 421 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 SLC38A3Q99624 504 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 BEX1Q9HBH7 125 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 VPS29Q9UBQ0 182 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 CLCA2Q9UQC9 943 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 RUVBL1Q9Y265 456 aaKnown RBP13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 EXOSC1Q9Y3B2 195 aaKnown RBP13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 ANXA2P2A6NMY6 339 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 SLC28A2O43868 658 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 ATP5A1P25705 553 aaKnown RBP13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 ELAVL4P26378 380 aaKnown RBP13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 ACSL1P33121 698 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 MAPKAPK2P49137 400 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 RPIAP49247 311 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 MEOX2P50222 304 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 SP140Q13342 867 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 ACSM5Q6NUN0 579 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 LRRC70Q7Z2Q7 622 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 CAMKMTQ7Z624 323 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 SPATA5L1Q9BVQ7 753 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 CINPQ9BW66 212 aaPredicted RBP13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 ACTR10Q9NZ32 417 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 IL17CQ9P0M4 197 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 DVL2O14641 736 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 GJB5O95377 273 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 OLFM2O95897 454 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 TFP02787 698 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 CELP19835 753 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 NPR2P20594 1047 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 GINS1Q14691 196 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 ZSWIM7Q19AV6 140 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 DCST1Q5T197 706 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 TOMM5Q8N4H5 51 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 SAMD12Q8N8I0 201 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 ZNF454Q8N9F8 522 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 OR56B4Q8NH76 319 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 APOBEC4Q8WW27 367 aaKnown RBP13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 SLC5A11Q8WWX8 675 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 EID2BQ96D98 161 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 C11orf24Q96F05 449 aaPredicted RBP13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 CHIAQ9BZP6 476 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 EVA1AQ9H8M9 152 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 CHST2Q9Y4C5 530 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 MCRIP1C9JLW8 97 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 D6RAR5 112 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 TMEM189-UBE2V1I3L0A0 370 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 SEMA7AO75326 666 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 HNMTP50135 292 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 RPS24P62847 133 aaKnown RBP13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 HBA1P69905 142 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 FGL1Q08830 312 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 HLXQ14774 488 aaPredicted RBP13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 B3GNTL1Q67FW5 361 aaPredicted RBP13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 PYHIN1Q6K0P9 492 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 SHFQ7M4L6 423 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 LHFPL3Q86UP9 236 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 RPLP0P6Q8NHW5 317 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 SLC35A5Q9BS91 424 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 SPON2Q9BUD6 331 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 GPR63Q9BZJ6 419 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 ACTR6Q9GZN1 396 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 GKN1Q9NS71 199 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 PIPOXQ9P0Z9 390 aa13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 TP53BP1Q12888 1972 aaPredicted RBP13.8□□□□□ -0.2
VPS9D1-201ENST00000389386 PQLC2LA1A4F0 135 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 IRGMA1A4Y4 181 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 LINC00587B1AMM8 73 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 H7C2Y5 167 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 FAAHO00519 579 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 CD3GP09693 182 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 IRF1P10914 325 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 NFYAP23511 347 aaPredicted RBP13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 AOAHP28039 575 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 THBS2P35442 1172 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 GIPRP48546 466 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 ACSM2AQ08AH3 577 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 MRPL58Q14197 206 aaKnown RBP13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 ZNF630Q2M218 657 aaPredicted RBP13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 ACSM2BQ68CK6 577 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 HBMQ6B0K9 141 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 FBXO46Q6PJ61 603 aaPredicted RBP13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 GPR26Q8NDV2 337 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 OR1S1Q8NH92 325 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 LRRC46Q96FV0 321 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 ASB6Q9NWX5 421 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 EMC3Q9P0I2 261 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 RNASET2O00584 256 aaKnown RBP13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 PRAMEF12O95522 483 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 GALTP07902 379 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 ANKRD34CP0C6C1 535 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 DGKGP49619 791 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 RAE1P78406 368 aaKnown RBP13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 ZNF155Q12901 538 aaPredicted RBP13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 EOGTQ5NDL2 527 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 VASNQ6EMK4 673 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 Q6ZTK2 550 aa13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 GOT1L1Q8NHS2 421 aaPredicted RBP13.79□□□□□ -0.2
VPS9D1-201ENST00000389386 SPATA6Q9NWH7 488 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms