RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 TDRD1Q9BXT4 1180 aaKnown RBP0.71□□□□□ -2.3
RNU6-42P-201ENST00000384165 YTHDF1Q9BYJ9 559 aaKnown RBP0.71□□□□□ -2.3
RNU6-42P-201ENST00000384165 KRTAP9-8Q9BYQ0 159 aa0.71□□□□□ -2.3
RNU6-42P-201ENST00000384165 KRTAP4-6Q9BYQ5 205 aa0.71□□□□□ -2.3
RNU6-42P-201ENST00000384165 PITPNM3Q9BZ71 974 aa0.71□□□□□ -2.3
RNU6-42P-201ENST00000384165 TM6SF2Q9BZW4 377 aa0.71□□□□□ -2.3
RNU6-42P-201ENST00000384165 CCDC68Q9H2F9 335 aa0.71□□□□□ -2.3
RNU6-42P-201ENST00000384165 RNF122Q9H9V4 155 aa0.71□□□□□ -2.3
RNU6-42P-201ENST00000384165 HELLSQ9NRZ9 838 aa0.71□□□□□ -2.3
RNU6-42P-201ENST00000384165 SLC7A10Q9NS82 523 aa0.71□□□□□ -2.3
RNU6-42P-201ENST00000384165 ANKEF1Q9NU02 776 aa0.71□□□□□ -2.3
RNU6-42P-201ENST00000384165 PAG1Q9NWQ8 432 aa0.71□□□□□ -2.3
RNU6-42P-201ENST00000384165 ZNRD1Q9P1U0 126 aa0.71□□□□□ -2.3
RNU6-42P-201ENST00000384165 SAE1Q9UBE0 346 aaPredicted RBP0.71□□□□□ -2.3
RNU6-42P-201ENST00000384165 DNAJB9Q9UBS3 223 aa0.71□□□□□ -2.3
RNU6-42P-201ENST00000384165 IP6K2Q9UHH9 426 aa0.71□□□□□ -2.3
RNU6-42P-201ENST00000384165 MAD2L2Q9UI95 211 aa0.71□□□□□ -2.3
RNU6-42P-201ENST00000384165 NUP214P35658 2090 aaPredicted RBP0.71□□□□□ -2.3
RNU6-42P-201ENST00000384165 DSPPQ9NZW4 1301 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 HEATR1Q9H583 2144 aaKnown RBP0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 A0A087WTM6 91 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 DEFB131BA0A096LNP1 70 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 IGHV2-70DA0A0C4DH43 119 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 IGHV1-69-2A0A0G2JMI3 117 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 TRBV11-1A0A0K0K1C0 115 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 PRSS51A0A1B0GVH4 220 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 CIB4A0PJX0 185 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 MSGN1A6NI15 193 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 OR5H1A6NKK0 313 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 ISM1B1AKI9 464 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 ATP6V1G2-DDX39BF2Z307 99 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 F5H5T6 163 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 M0R233 179 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 GPR171O14626 319 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 PGRMC2O15173 223 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 ADAMDEC1O15204 470 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 GPAA1O43292 621 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 RAD51CO43502 376 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 CYTH3O43739 400 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 SYNGR3O43761 229 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 EIF4E2O60573 245 aaKnown RBP0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 USO1O60763 962 aaKnown RBP0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 ZNF821O75541 412 aaPredicted RBP0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 RP2O75695 350 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 SEMA3DO95025 777 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 TBX6O95947 436 aaPredicted RBP0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 CRYAAP02489 173 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 PYGLP06737 847 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 CCL3P10147 92 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 FCGR2AP12318 317 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 ALOX15P16050 662 aaPredicted RBP0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 TRIM21P19474 475 aaKnown RBP0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 WARSP23381 471 aaKnown RBP0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 MPGP29372 298 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 GNALP38405 381 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 PMELP40967 661 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 SOX3P41225 446 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 FMO5P49326 533 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 UBASH3AP57075 661 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 TBX4P57082 545 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 SLC3A1Q07837 685 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 KLHL30Q0D2K2 578 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 AP3B2Q13367 1082 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 CUL4AQ13619 759 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 BOP1Q14137 746 aaKnown RBP0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 SERTAD2Q14140 314 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 MCM6Q14566 821 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 KIR2DS1Q14954 304 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 KRT72Q14CN4 511 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 MORF4L2Q15014 288 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 CYTH1Q15438 398 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 TGFBIQ15582 683 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 PPP2R5EQ16537 467 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 ME3Q16798 604 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 VWA3BQ502W6 1294 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 ZMAT1Q5H9K5 638 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 WASHC2DQ5SRD0 308 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 IFIT1BQ5T764 474 aaKnown RBP0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 METTL11BQ5VVY1 283 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 Q6ZWC4 215 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 DYMQ7RTS9 669 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 SCXQ7RTU7 201 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 LDB1Q86U70 411 aaPredicted RBP0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 TRIM74Q86UV6 250 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 PACS2Q86VP3 889 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 PTOV1Q86YD1 416 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 PASD1Q8IV76 773 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 GABRG1Q8N1C3 465 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 ARMC10Q8N2F6 343 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 ABHD12Q8N2K0 398 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 C17orf53Q8N3J3 647 aaPredicted RBP0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 SPICQ8N5J4 248 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 PLD5Q8N7P1 536 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 CAMKVQ8NCB2 501 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 OR2AP1Q8NGE2 309 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 OR13C5Q8NGS8 318 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 OR4Q3Q8NH05 313 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 OR14L1PQ8NHC6 308 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 GSDMBQ8TAX9 411 aa0.7□□□□□ -2.3
RNU6-42P-201ENST00000384165 DNAJA4Q8WW22 397 aaPredicted RBP0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms