RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 OR2G6Q5TZ20 316 aa17.82■□□□□ 0.44
CSPG5-202ENST00000383738 CNIH2Q6PI25 160 aa17.82■□□□□ 0.44
CSPG5-202ENST00000383738 FAM109AQ8N4B1 249 aa17.82■□□□□ 0.44
CSPG5-202ENST00000383738 NATD1Q8N6N6 113 aa17.82■□□□□ 0.44
CSPG5-202ENST00000383738 UBE2QL1A1L167 161 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 ANKRD28O15084 1053 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 HOXC11O43248 304 aaPredicted RBP17.81■□□□□ 0.44
CSPG5-202ENST00000383738 NARSO43776 548 aaKnown RBP17.81■□□□□ 0.44
CSPG5-202ENST00000383738 TP53P04637 393 aaPredicted RBP17.81■□□□□ 0.44
CSPG5-202ENST00000383738 TGFBR2P37173 567 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 TPMTP51580 245 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 EFR3AQ14156 821 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 PTGES3Q15185 160 aaKnown RBP17.81■□□□□ 0.44
CSPG5-202ENST00000383738 ZNF311Q5JNZ3 666 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 PRSS36Q5K4E3 855 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 SFRP4Q6FHJ7 346 aaPredicted RBP17.81■□□□□ 0.44
CSPG5-202ENST00000383738 IL20RBQ6UXL0 311 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 RSPRY1Q96DX4 576 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 NELL2Q99435 816 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 C6orf106Q9H6K1 298 aaPredicted RBP17.81■□□□□ 0.44
CSPG5-202ENST00000383738 NCDNQ9UBB6 729 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 MPZL2O60487 215 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 H1F0P07305 194 aaKnown RBP17.81■□□□□ 0.44
CSPG5-202ENST00000383738 PRLHRP49683 370 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 POU6F2P78424 691 aaPredicted RBP17.81■□□□□ 0.44
CSPG5-202ENST00000383738 TAP2Q03519 686 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 NDUFAF5Q5TEU4 345 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 DLEU7Q6UYE1 221 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 FAM98AQ8NCA5 519 aaKnown RBP17.81■□□□□ 0.44
CSPG5-202ENST00000383738 CDCP1Q9H5V8 836 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 UBE2ZQ9H832 354 aaPredicted RBP17.81■□□□□ 0.44
CSPG5-202ENST00000383738 GALNT9Q9HCQ5 603 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 FAM120CQ9NX05 1096 aaKnown RBP17.81■□□□□ 0.44
CSPG5-202ENST00000383738 PRKRAO75569 313 aaKnown RBP17.81■□□□□ 0.44
CSPG5-202ENST00000383738 IHHQ14623 411 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 COMMD7Q86VX2 200 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 ENTHD1Q8IYW4 607 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 OR13H1Q8NG92 308 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 OR51G2Q8NGK0 314 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 EID2BQ96D98 161 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 C11orf54Q9H0W9 315 aaPredicted RBP17.81■□□□□ 0.44
CSPG5-202ENST00000383738 ZNF385DQ9H6B1 395 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 TMEM27Q9HBJ8 222 aa17.81■□□□□ 0.44
CSPG5-202ENST00000383738 CDK1P06493 297 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 RETP07949 1114 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 PIM1P11309 404 aaPredicted RBP17.8■□□□□ 0.44
CSPG5-202ENST00000383738 CRISP1P54107 249 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 TMEM196Q5HYL7 178 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 OR2L2Q8NH16 312 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 GEMIN6Q8WXD5 167 aaKnown RBP17.8■□□□□ 0.44
CSPG5-202ENST00000383738 C5orf34Q96MH7 638 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 SPATA9Q9BWV2 254 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 GORASP2Q9H8Y8 452 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 SLC23A2Q9UGH3 650 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 LYRM1O43325 122 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 FRS3O43559 492 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 LDB3O75112 727 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 NAT1P18440 290 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 SLC25A25Q6KCM7 469 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 HSDL2Q6YN16 418 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 ZNF367Q7RTV3 350 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 OR2T35Q8NGX2 323 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 SLC25A36Q96CQ1 311 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 DGAT2Q96PD7 388 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 ERMAPQ96PL5 475 aaPredicted RBP17.8■□□□□ 0.44
CSPG5-202ENST00000383738 CLEC2DQ9UHP7 191 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 A0A0A6YYC8 382 aaPredicted RBP17.8■□□□□ 0.44
CSPG5-202ENST00000383738 I3L1I5 382 aaPredicted RBP17.8■□□□□ 0.44
CSPG5-202ENST00000383738 L7N2F9 121 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 OR7A17O14581 309 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 SLC16A5O15375 505 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 MRPL3P09001 348 aaKnown RBP17.8■□□□□ 0.44
CSPG5-202ENST00000383738 ZNF806P0C7X5 589 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 CLDN8P56748 225 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 PPP2CBP62714 309 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 PPP2CAP67775 309 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 SPATS1Q496A3 300 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 WASH2PQ6VEQ5 465 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 SLC16A12Q6ZSM3 486 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 PDZD3Q86UT5 571 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 VNN3Q9NY84 501 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 HMX3A6NHT5 357 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 C2CD4DB7Z1M9 353 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 SYT6Q5T7P8 510 aaPredicted RBP17.8■□□□□ 0.44
CSPG5-202ENST00000383738 C6orf120Q7Z4R8 191 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 OR4K14Q8NGD5 310 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 DIABLOQ9NR28 239 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 ZNF69Q9UC07 566 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 NUP50Q9UKX7 468 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 WDR45Q9Y484 360 aa17.8■□□□□ 0.44
CSPG5-202ENST00000383738 TCRBV5S2A0A599 114 aa17.79■□□□□ 0.44
CSPG5-202ENST00000383738 SLC9B1P1A6NJY1 282 aa17.79■□□□□ 0.44
CSPG5-202ENST00000383738 HPGDSO60760 199 aa17.79■□□□□ 0.44
CSPG5-202ENST00000383738 S100A9P06702 114 aaKnown RBP17.79■□□□□ 0.44
CSPG5-202ENST00000383738 CDH11P55287 796 aa17.79■□□□□ 0.44
CSPG5-202ENST00000383738 RPS26P11Q5JNZ5 115 aaPredicted RBP17.79■□□□□ 0.44
CSPG5-202ENST00000383738 PTRH1Q86Y79 214 aaKnown RBP17.79■□□□□ 0.44
CSPG5-202ENST00000383738 C16orf78Q8WTQ4 265 aa17.79■□□□□ 0.44
CSPG5-202ENST00000383738 MAP6Q96JE9 813 aa17.79■□□□□ 0.44
CSPG5-202ENST00000383738 MVB12BQ9H7P6 319 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms