RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 SF3A2Q15428 464 aaKnown RBP13.28□□□□□ -0.28
SNPH-201ENST00000381867 OR13C3Q8NGS6 347 aa13.28□□□□□ -0.28
SNPH-201ENST00000381867 WDR20Q8TBZ3 569 aa13.28□□□□□ -0.28
SNPH-201ENST00000381867 ISG20Q96AZ6 181 aaKnown RBP13.28□□□□□ -0.28
SNPH-201ENST00000381867 SGTBQ96EQ0 304 aa13.28□□□□□ -0.28
SNPH-201ENST00000381867 MEPEQ9NQ76 525 aaPredicted RBP13.28□□□□□ -0.28
SNPH-201ENST00000381867 USP3Q9Y6I4 520 aa13.28□□□□□ -0.28
SNPH-201ENST00000381867 F5H5P2 479 aa13.27□□□□□ -0.28
SNPH-201ENST00000381867 PHYHO14832 338 aa13.27□□□□□ -0.28
SNPH-201ENST00000381867 CSTAP01040 98 aa13.27□□□□□ -0.28
SNPH-201ENST00000381867 OR4D1Q15615 310 aa13.27□□□□□ -0.28
SNPH-201ENST00000381867 PRRT3Q5FWE3 981 aa13.27□□□□□ -0.28
SNPH-201ENST00000381867 WDR92Q96MX6 357 aa13.27□□□□□ -0.28
SNPH-201ENST00000381867 FAM221BA6H8Z2 402 aa13.27□□□□□ -0.28
SNPH-201ENST00000381867 NAP1L6A6NFF2 107 aa13.27□□□□□ -0.28
SNPH-201ENST00000381867 ARPC5O15511 151 aa13.27□□□□□ -0.28
SNPH-201ENST00000381867 EDIL3O43854 480 aa13.27□□□□□ -0.28
SNPH-201ENST00000381867 T-ENOLP0DO92 83 aa13.27□□□□□ -0.28
SNPH-201ENST00000381867 GABRA3P34903 492 aa13.27□□□□□ -0.28
SNPH-201ENST00000381867 MAGEA3P43357 314 aa13.27□□□□□ -0.28
SNPH-201ENST00000381867 CNIH2Q6PI25 160 aa13.27□□□□□ -0.28
SNPH-201ENST00000381867 PIWIL3Q7Z3Z3 882 aaKnown RBP13.27□□□□□ -0.28
SNPH-201ENST00000381867 TMEM234Q8WY98 164 aa13.27□□□□□ -0.28
SNPH-201ENST00000381867 MR1Q95460 341 aa13.27□□□□□ -0.28
SNPH-201ENST00000381867 KLHL15Q96M94 604 aa13.27□□□□□ -0.28
SNPH-201ENST00000381867 ZBTB20Q9HC78 741 aaPredicted RBP13.27□□□□□ -0.28
SNPH-201ENST00000381867 KIAA0355O15063 1070 aa13.27□□□□□ -0.29
SNPH-201ENST00000381867 OR8U9P0C7N5 309 aa13.27□□□□□ -0.29
SNPH-201ENST00000381867 CDK2P24941 298 aa13.27□□□□□ -0.29
SNPH-201ENST00000381867 ZNF791Q3KP31 576 aaPredicted RBP13.27□□□□□ -0.29
SNPH-201ENST00000381867 LRIT3Q3SXY7 679 aa13.27□□□□□ -0.29
SNPH-201ENST00000381867 GLYATL1Q969I3 302 aa13.27□□□□□ -0.29
SNPH-201ENST00000381867 OR2M4Q96R27 311 aa13.27□□□□□ -0.29
SNPH-201ENST00000381867 KLF16Q9BXK1 252 aaPredicted RBP13.27□□□□□ -0.29
SNPH-201ENST00000381867 CACNG2Q9Y698 323 aa13.27□□□□□ -0.29
SNPH-201ENST00000381867 DRGXA6NNA5 263 aa13.27□□□□□ -0.29
SNPH-201ENST00000381867 ANHXE9PGG2 379 aa13.27□□□□□ -0.29
SNPH-201ENST00000381867 MAS1P04201 325 aa13.27□□□□□ -0.29
SNPH-201ENST00000381867 IFNA4P05014 189 aa13.27□□□□□ -0.29
SNPH-201ENST00000381867 RPS2P15880 293 aaKnown RBP13.27□□□□□ -0.29
SNPH-201ENST00000381867 IVDP26440 423 aa13.27□□□□□ -0.29
SNPH-201ENST00000381867 DCTP40126 519 aa13.27□□□□□ -0.29
SNPH-201ENST00000381867 RIDAP52758 137 aaKnown RBP13.27□□□□□ -0.29
SNPH-201ENST00000381867 SH3BP2P78314 561 aa13.27□□□□□ -0.29
SNPH-201ENST00000381867 SLC10A2Q12908 348 aaPredicted RBP13.27□□□□□ -0.29
SNPH-201ENST00000381867 OR52E8Q6IFG1 317 aa13.27□□□□□ -0.29
SNPH-201ENST00000381867 ZER1Q7Z7L7 766 aa13.27□□□□□ -0.29
SNPH-201ENST00000381867 SCD5Q86SK9 330 aa13.27□□□□□ -0.29
SNPH-201ENST00000381867 FBXO27Q8NI29 283 aa13.27□□□□□ -0.29
SNPH-201ENST00000381867 PTGES2Q9H7Z7 377 aa13.27□□□□□ -0.29
SNPH-201ENST00000381867 ANKMY1Q9P2S6 941 aa13.27□□□□□ -0.29
SNPH-201ENST00000381867 C1orf226A1L170 272 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 JRKO75564 520 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 SPDEFO95238 335 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 TSPAN15O95858 294 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 PTPN6P29350 595 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 GPR4P46093 362 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 KCNC1P48547 511 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 WNT4P56705 351 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 ACBD4Q8NC06 268 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 SLC29A1Q99808 456 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 TMEM45AQ9NWC5 275 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 KCNS2Q9ULS6 477 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 TIMM8BQ9Y5J9 83 aaPredicted RBP13.26□□□□□ -0.29
SNPH-201ENST00000381867 CYCSP99999 105 aaKnown RBP13.26□□□□□ -0.29
SNPH-201ENST00000381867 CFAP77Q6ZQR2 320 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 OR52N2Q8NGI0 321 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 ZFP90Q8TF47 636 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 CHPT1Q8WUD6 406 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 FOXJ1Q92949 421 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 MSLNLQ96KJ4 702 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 ZNF597Q96LX8 424 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 WDR77Q9BQA1 342 aaPredicted RBP13.26□□□□□ -0.29
SNPH-201ENST00000381867 MARCH4Q9P2E8 410 aaPredicted RBP13.26□□□□□ -0.29
SNPH-201ENST00000381867 CA14Q9ULX7 337 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 SLC7A11Q9UPY5 501 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 ENPP4Q9Y6X5 453 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 A0A0A6YYH2 397 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 A6NJ64 397 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 ZNF850A8MQ14 1090 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 G3V2L1 256 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 DNAJB6O75190 326 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 IFNA10P01566 189 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 HEXBP07686 556 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 DHRS4L1P0CG22 281 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 HNF1BP35680 557 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 APOFQ13790 326 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 ELOAQ14241 798 aaKnown RBP13.26□□□□□ -0.29
SNPH-201ENST00000381867 GRIN2CQ14957 1233 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 MICAQ29983 383 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 GPR157Q5UAW9 335 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.26□□□□□ -0.29
SNPH-201ENST00000381867 MVB12BQ9H7P6 319 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 ZFP57Q9NU63 452 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 DIRAS3O95661 229 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 POLR2CP19387 275 aaPredicted RBP13.26□□□□□ -0.29
SNPH-201ENST00000381867 ETV4P43268 484 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 CSNK1DP48730 415 aa13.26□□□□□ -0.29
SNPH-201ENST00000381867 TMEM173Q86WV6 379 aaPredicted RBP13.26□□□□□ -0.29
SNPH-201ENST00000381867 OR52B6Q8NGF0 335 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms