RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 CBLCQ9ULV8 474 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 TFR2Q9UP52 801 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 NOX1Q9Y5S8 564 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 ZNF780BQ9Y6R6 833 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 A0A1W2PQH9 124 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 LNP1A1A4G5 178 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 MID1O15344 667 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 C22orf31O95567 290 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 MGMTP16455 207 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 ITPKBP27987 946 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 IMPA1P29218 277 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 POU4F3Q15319 338 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 ABCA11PQ4W5N1 156 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 TRILQ7L0X0 811 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 LGI4Q8N135 537 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 PARP16Q8N5Y8 322 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 IL22RA1Q8N6P7 574 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 FAM71CQ8NEG0 241 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 LRR1Q96L50 414 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 SNRNP25Q9BV90 132 aaKnown RBP4.65□□□□□ -1.67
PTPRD-203ENST00000381196 TAPBPLQ9BX59 468 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 DPH1Q9BZG8 443 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 WDR55Q9H6Y2 383 aaPredicted RBP4.65□□□□□ -1.67
PTPRD-203ENST00000381196 TMEM27Q9HBJ8 222 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 PPT2Q9UMR5 302 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 KCNU1A8MYU2 1149 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 RNASET2O00584 256 aaKnown RBP4.65□□□□□ -1.67
PTPRD-203ENST00000381196 CXCR1P25024 350 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 C21orf58P58505 322 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 RPS14P62263 151 aaKnown RBP4.65□□□□□ -1.67
PTPRD-203ENST00000381196 CCL14Q16627 93 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 GLT8D1Q68CQ7 371 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 NIPAL3Q6P499 406 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 GK5Q6ZS86 529 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 JAZF1Q86VZ6 243 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 TMEM102Q8N9M5 508 aaPredicted RBP4.65□□□□□ -1.67
PTPRD-203ENST00000381196 OR13D1Q8NGV5 346 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 OR5H6Q8NGV6 325 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 LILRB1Q8NHL6 650 aaPredicted RBP4.65□□□□□ -1.67
PTPRD-203ENST00000381196 ACOT11Q8WXI4 607 aaPredicted RBP4.65□□□□□ -1.67
PTPRD-203ENST00000381196 NOL4LQ96MY1 436 aaPredicted RBP4.65□□□□□ -1.67
PTPRD-203ENST00000381196 CDADC1Q9BWV3 514 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 ZNF471Q9BX82 626 aaPredicted RBP4.65□□□□□ -1.67
PTPRD-203ENST00000381196 PLEKHA1Q9HB21 404 aa4.65□□□□□ -1.67
PTPRD-203ENST00000381196 LOC285556D6RIA3 1793 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 SYT5O00445 386 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 MAFKO60675 156 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 MTX2O75431 263 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 CDK14O94921 469 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 PTBP3O95758 552 aaKnown RBP4.64□□□□□ -1.67
PTPRD-203ENST00000381196 BPNT1O95861 308 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 TFP02787 698 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 SLC35G6P0C7Q6 338 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 TCEA1P23193 301 aaKnown RBP4.64□□□□□ -1.67
PTPRD-203ENST00000381196 SNCAP37840 140 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 SPHARQ15513 63 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 SF1Q15637 639 aaKnown RBP4.64□□□□□ -1.67
PTPRD-203ENST00000381196 CHRNA6Q15825 494 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 C9orf57Q5W0N0 161 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 KANSL1Q7Z3B3 1105 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 ARL14EPQ8N8R7 260 aaPredicted RBP4.64□□□□□ -1.67
PTPRD-203ENST00000381196 GPR26Q8NDV2 337 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 C3orf58Q8NDZ4 430 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 GNPDA2Q8TDQ7 276 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 TMEM125Q96AQ2 219 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 DIMT1Q9UNQ2 313 aaKnown RBP4.64□□□□□ -1.67
PTPRD-203ENST00000381196 TVP23AA6NH52 213 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 FZD9O00144 591 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 FFAR2O15552 330 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 SELENOFO60613 162 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 ERAL1O75616 437 aaKnown RBP4.64□□□□□ -1.67
PTPRD-203ENST00000381196 C1RP00736 705 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 MPC1LP0DKB6 136 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 SPATA31C1P0DKV0 1188 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 TACR2P21452 398 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 ACTR1BP42025 376 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 CLCNKAP51800 687 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 ACTR1AP61163 376 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 RPP30P78346 268 aaKnown RBP4.64□□□□□ -1.67
PTPRD-203ENST00000381196 PLEKHS1Q5SXH7 462 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 MSANTD2Q6P1R3 559 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 SMARCD3Q6STE5 483 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 ADGRG5Q8IZF4 528 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 CADM2Q8N3J6 435 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 CCDC71LQ8N9Z2 235 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 RNF31Q96EP0 1072 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 OR14A2Q96R54 314 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 MGLLQ99685 303 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 UBQLN3Q9H347 655 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 DUSP21Q9H596 190 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 C19orf25Q9UFG5 118 aaPredicted RBP4.64□□□□□ -1.67
PTPRD-203ENST00000381196 MRPS7Q9Y2R9 242 aaKnown RBP4.64□□□□□ -1.67
PTPRD-203ENST00000381196 YIPF1Q9Y548 306 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 YDJCA8MPS7 323 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 HSBP1L1C9JCN9 74 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 F8W036 122 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 XKRYO14609 159 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 MMP20O60882 483 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 OR4Q2P0C623 313 aa4.64□□□□□ -1.67
PTPRD-203ENST00000381196 FDXRP22570 491 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms