RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 PPP1CAP62136 330 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 CD83Q01151 205 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 PRKCDQ05655 676 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 KEAP1Q14145 624 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 PXDC1Q5TGL8 231 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 SYT13Q7L8C5 426 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 CCDC71Q8IV32 467 aaPredicted RBP13.39□□□□□ -0.27
CLCN4-201ENST00000380829 LGI4Q8N135 537 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 OR8H2Q8N162 312 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 SETD9Q8NE22 299 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 TSTD1Q8NFU3 115 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 OR9A2Q8NGT5 310 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 FBLIM1Q8WUP2 373 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 MSANTD3Q96H12 275 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 SLC6A18Q96N87 628 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 COL21A1Q96P44 957 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 PIP5K1AQ99755 562 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 NIPSNAP1Q9BPW8 284 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 SLC2A4RGQ9NR83 387 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 P2RX2Q9UBL9 471 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 NDRG4Q9ULP0 352 aaKnown RBP13.39□□□□□ -0.27
CLCN4-201ENST00000380829 TPRKBQ9Y3C4 175 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 ENPP4Q9Y6X5 453 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 COL6A3P12111 3177 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 TDRD6O60522 2096 aaKnown RBP13.39□□□□□ -0.27
CLCN4-201ENST00000380829 CLDN24A6NM45 220 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 B8ZZF3 427 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 HMGN2P05204 90 aaKnown RBP13.39□□□□□ -0.27
CLCN4-201ENST00000380829 NR2F6P10588 404 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 NR2F1P10589 423 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 CTSEP14091 401 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 KRT20P35900 424 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 SLC15A1P46059 708 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 ARFIP1P53367 373 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 LIM2P55344 173 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 RPP38P78345 283 aaKnown RBP13.39□□□□□ -0.27
CLCN4-201ENST00000380829 SHISA5Q8N114 240 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 VANGL1Q8TAA9 524 aaPredicted RBP13.39□□□□□ -0.27
CLCN4-201ENST00000380829 NT5CQ8TCD5 201 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 C16orf58Q96GQ5 468 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 CCDC120Q96HB5 630 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 WFDC6Q9BQY6 131 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 ROGDIQ9GZN7 287 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 MMP28Q9H239 520 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 SEMA3GQ9NS98 782 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 ACER3Q9NUN7 267 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 TMEM74BQ9NUR3 256 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 POT1Q9NUX5 634 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 HRASLS2Q9NWW9 162 aa13.39□□□□□ -0.27
CLCN4-201ENST00000380829 NUFIP1Q9UHK0 495 aaKnown RBP13.39□□□□□ -0.27
CLCN4-201ENST00000380829 NINQ8N4C6 2090 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 ZNF860A6NHJ4 632 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 TNFSF14O43557 240 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 POU2F1P14859 743 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 CSNK2A2P19784 350 aaPredicted RBP13.38□□□□□ -0.27
CLCN4-201ENST00000380829 UQCRC1P31930 480 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 MC3RP41968 323 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 UBE2IP63279 158 aaKnown RBP13.38□□□□□ -0.27
CLCN4-201ENST00000380829 OLR1P78380 273 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 LTB4RQ15722 352 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 MICAQ29983 383 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 FAM205BPQ63HN1 556 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 TMEFF1Q8IYR6 380 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 APOBEC4Q8WW27 367 aaKnown RBP13.38□□□□□ -0.27
CLCN4-201ENST00000380829 KLHL6Q8WZ60 621 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 KAT2AQ92830 837 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 TM4SF19Q96DZ7 209 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 ITPAQ9BY32 194 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 SLC7A5P2Q9GIP4 190 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 EQTNQ9NQ60 294 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 C12orf4Q9NQ89 552 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 ZSCAN32Q9NX65 697 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 SCN3BQ9NY72 215 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 SEC14L3Q9UDX4 400 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 PILRAQ9UKJ1 303 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 RNF6Q9Y252 685 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 A0A1W2PPC4 97 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 FAM227AF5H4B4 570 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 FFAR1O14842 300 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 GADD45GO95257 159 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 YES1P07947 543 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 JUNDP17535 347 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 POU6F2P78424 691 aaPredicted RBP13.38□□□□□ -0.27
CLCN4-201ENST00000380829 KRR1Q13601 381 aaKnown RBP13.38□□□□□ -0.27
CLCN4-201ENST00000380829 ZNF605Q86T29 641 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 RBM45Q8IUH3 476 aaKnown RBP13.38□□□□□ -0.27
CLCN4-201ENST00000380829 SLC38A4Q969I6 547 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 ZNF681Q96N22 645 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 APOL4Q9BPW4 351 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 ORAI3Q9BRQ5 295 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 TWSG1Q9GZX9 223 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 LYARQ9NX58 379 aaKnown RBP13.38□□□□□ -0.27
CLCN4-201ENST00000380829 MRPS2Q9Y399 296 aaKnown RBP13.38□□□□□ -0.27
CLCN4-201ENST00000380829 ZNF780BQ9Y6R6 833 aa13.38□□□□□ -0.27
CLCN4-201ENST00000380829 MYO15AQ9UKN7 3530 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 MEIOCA2RUB1 952 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 C2orf74A8MZ97 194 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 B4DGG1 531 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 LOC110117498-PIK3R3F6TDL0 507 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 SEMA7AO75326 666 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms