RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 CORO7P57737 925 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 PPIAP62937 165 aaKnown RBP8.49□□□□□ -1.05
HMGN1-202ENST00000380747 NTRK2Q16620 822 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 SMU1Q2TAY7 513 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 PGS1Q32NB8 556 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 RNFT1Q5M7Z0 435 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 PRAMEF20Q5VT98 475 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 SLC22A10Q63ZE4 541 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 NXNQ6DKJ4 435 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 SZRD1Q7Z422 152 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 SLC44A2Q8IWA5 706 aaPredicted RBP8.49□□□□□ -1.05
HMGN1-202ENST00000380747 FBXW8Q8N3Y1 598 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 C17orf47Q8NEP4 570 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 PAQR8Q8TEZ7 354 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 NUDT8Q8WV74 236 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 DIO2Q92813 273 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 GTPBP3Q969Y2 492 aaKnown RBP8.49□□□□□ -1.05
HMGN1-202ENST00000380747 OMA1Q96E52 524 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 HSPBAP1Q96EW2 488 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 ZBED6CLQ96FA7 236 aaPredicted RBP8.49□□□□□ -1.05
HMGN1-202ENST00000380747 ZNF764Q96H86 408 aaPredicted RBP8.49□□□□□ -1.05
HMGN1-202ENST00000380747 FAM173AQ9BQD7 235 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 DPY30Q9C005 99 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 WDR55Q9H6Y2 383 aaPredicted RBP8.49□□□□□ -1.05
HMGN1-202ENST00000380747 EQTNQ9NQ60 294 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 INTS9Q9NV88 658 aaKnown RBP8.49□□□□□ -1.05
HMGN1-202ENST00000380747 ATAD3AQ9NVI7 634 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 ZNF446Q9NWS9 450 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 ASIC5Q9NY37 505 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 CNIH4Q9P003 139 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 CNOT11Q9UKZ1 510 aaKnown RBP8.49□□□□□ -1.05
HMGN1-202ENST00000380747 SLC5A6Q9Y289 635 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 OR10H1Q9Y4A9 318 aa8.49□□□□□ -1.05
HMGN1-202ENST00000380747 ACOT7O00154 380 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 UPK1AO00322 258 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 PLOD2O00469 737 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 CFLARO15519 480 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 HS6ST1O60243 411 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 CDC40O60508 579 aaKnown RBP eCLIP8.48□□□□□ -1.05
HMGN1-202ENST00000380747 REM1O75628 298 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 PPM1BO75688 479 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 ABCB1P08183 1280 aaPredicted RBP8.48□□□□□ -1.05
HMGN1-202ENST00000380747 CT45A8P0DMV1 189 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 CT45A9P0DMV2 189 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 NAGAP17050 411 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 EPHA3P29320 983 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 KRT20P35900 424 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 NME5P56597 212 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 CLDN8P56748 225 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 KCNJ2P63252 427 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 RPP38P78345 283 aaKnown RBP8.48□□□□□ -1.05
HMGN1-202ENST00000380747 HSF1Q00613 529 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 TNP2Q05952 138 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 RPS6KA2Q15349 733 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 ZNHIT3Q15649 155 aaPredicted RBP8.48□□□□□ -1.05
HMGN1-202ENST00000380747 SPDYE7PQ495Y7 208 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 CT45A2Q5DJT8 189 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 NPSR1Q6W5P4 371 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 LARP4Q71RC2 724 aaKnown RBP eCLIP8.48□□□□□ -1.051e-8■■■■■ 31.7
HMGN1-202ENST00000380747 SPATA19Q7Z5L4 167 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 WDR53Q7Z5U6 358 aaPredicted RBP8.48□□□□□ -1.05
HMGN1-202ENST00000380747 RIMKLAQ8IXN7 391 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 OR2L13Q8N349 312 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 ZFP62Q8NB50 900 aaPredicted RBP8.48□□□□□ -1.05
HMGN1-202ENST00000380747 NUP43Q8NFH3 380 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 PIWIL2Q8TC59 973 aaKnown RBP8.48□□□□□ -1.05
HMGN1-202ENST00000380747 SPPL2AQ8TCT8 520 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 OR5P2Q8WZ92 322 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 TMBIM1Q969X1 311 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 JSRP1Q96MG2 331 aaPredicted RBP8.48□□□□□ -1.05
HMGN1-202ENST00000380747 VSTM2LQ96N03 204 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 GPR137Q96N19 417 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 BTBD9Q96Q07 612 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 DOHHQ9BU89 302 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 DUSP26Q9BV47 211 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 TTTY12Q9BZ98 90 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 DEFB127Q9H1M4 99 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 METTL7AQ9H8H3 244 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 C3orf14Q9HBI5 128 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 SH2D2AQ9NP31 389 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 ACSS1Q9NUB1 689 aaPredicted RBP8.48□□□□□ -1.05
HMGN1-202ENST00000380747 TUBA8Q9NY65 449 aaPredicted RBP8.48□□□□□ -1.05
HMGN1-202ENST00000380747 C19orf53Q9UNZ5 99 aaPredicted RBP8.48□□□□□ -1.05
HMGN1-202ENST00000380747 GPR55Q9Y2T6 319 aaPredicted RBP8.48□□□□□ -1.05
HMGN1-202ENST00000380747 SNX8Q9Y5X2 465 aa8.48□□□□□ -1.05
HMGN1-202ENST00000380747 CHCHD2Q9Y6H1 151 aaPredicted RBP8.48□□□□□ -1.05
HMGN1-202ENST00000380747 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.48□□□□□ -1.05
HMGN1-202ENST00000380747 TO15178 435 aa8.47□□□□□ -1.05
HMGN1-202ENST00000380747 ZNHIT1O43257 154 aa8.47□□□□□ -1.05
HMGN1-202ENST00000380747 EMC8O43402 210 aa8.47□□□□□ -1.05
HMGN1-202ENST00000380747 ASNA1O43681 348 aa8.47□□□□□ -1.05
HMGN1-202ENST00000380747 DIAPH2O60879 1101 aa8.47□□□□□ -1.05
HMGN1-202ENST00000380747 PDE9AO76083 593 aa8.47□□□□□ -1.05
HMGN1-202ENST00000380747 C6orf47O95873 294 aa8.47□□□□□ -1.05
HMGN1-202ENST00000380747 IL12BP29460 328 aa8.47□□□□□ -1.05
HMGN1-202ENST00000380747 GABRA3P34903 492 aa8.47□□□□□ -1.05
HMGN1-202ENST00000380747 SOAT1P35610 550 aa8.47□□□□□ -1.05
HMGN1-202ENST00000380747 FRKP42685 505 aaPredicted RBP8.47□□□□□ -1.05
HMGN1-202ENST00000380747 RBPJQ06330 500 aa8.47□□□□□ -1.05
HMGN1-202ENST00000380747 LSM12Q3MHD2 195 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms