RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 RNF149Q8NC42 400 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 GPR26Q8NDV2 337 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 CLEC4CQ8WTT0 213 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 MAPKAP1Q9BPZ7 522 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 SOSTQ9BQB4 213 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 NAA11Q9BSU3 229 aaPredicted RBP8.84□□□□□ -0.99
PTPRA-204ENST00000380393 CACNG6Q9BXT2 260 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 TLNRD1Q9H1K6 362 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 RNF19AQ9NV58 838 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 TXNL4BQ9NX01 149 aaKnown RBP8.84□□□□□ -0.99
PTPRA-204ENST00000380393 MGAT4CQ9UBM8 478 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 ELOVL7A1L3X0 281 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 EREGO14944 169 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 MFSD11O43934 449 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 AP2A1O95782 977 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 CRYABP02511 175 aaKnown RBP8.84□□□□□ -0.99
PTPRA-204ENST00000380393 HPXP02790 462 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 LINC00614P0C842 121 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 AGAP20933 346 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 FPR1P21462 350 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 CNR1P21554 472 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 TBXA2RP21731 343 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 CD96P40200 585 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 RAB10P61026 200 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 SEC61A1P61619 476 aaKnown RBP8.84□□□□□ -0.99
PTPRA-204ENST00000380393 DHODHQ02127 395 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 ARHGEF7Q14155 803 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 OCLNQ16625 522 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 GOLGA7BQ2TAP0 167 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 COL13A1Q5TAT6 717 aaPredicted RBP8.84□□□□□ -0.99
PTPRA-204ENST00000380393 DMRTA1Q5VZB9 504 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 SLC25A24Q6NUK1 477 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 UQCC3Q6UW78 93 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 TMEM192Q8IY95 271 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 C22orf15Q8WYQ4 148 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 CCDC74BQ96LY2 380 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 ZNF385AQ96PM9 386 aaKnown RBP8.84□□□□□ -0.99
PTPRA-204ENST00000380393 RHOJQ9H4E5 214 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 STOX2Q9P2F5 926 aaPredicted RBP8.84□□□□□ -0.99
PTPRA-204ENST00000380393 GPR55Q9Y2T6 319 aaPredicted RBP8.84□□□□□ -0.99
PTPRA-204ENST00000380393 FXYD6-FXYD2A0A087WZ82 144 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 PIP5K1CO60331 668 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 CBR3O75828 277 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 YIF1AO95070 293 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 SCELO95171 688 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 ANXA2P07355 339 aaKnown RBP8.84□□□□□ -1
PTPRA-204ENST00000380393 GJB1P08034 283 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 NCF1P14598 390 aaPredicted RBP8.84□□□□□ -1
PTPRA-204ENST00000380393 UGT2B7P16662 529 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 NMBRP28336 390 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 DNAJA1P31689 397 aaKnown RBP8.84□□□□□ -1
PTPRA-204ENST00000380393 BTCP35070 178 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 ITGA1P56199 1179 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 SREBF2Q12772 1141 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 TRA2AQ13595 282 aaKnown RBP eCLIP8.84□□□□□ -1
PTPRA-204ENST00000380393 AMHR2Q16671 573 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 FAM69AQ5T7M9 428 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 ZNF783Q6ZMS7 281 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 ZNF730Q6ZMV8 503 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 ZNF551Q7Z340 670 aaPredicted RBP8.84□□□□□ -1
PTPRA-204ENST00000380393 ZNF784Q8NCA9 323 aaPredicted RBP8.84□□□□□ -1
PTPRA-204ENST00000380393 NDRG1Q92597 394 aaKnown RBP8.84□□□□□ -1
PTPRA-204ENST00000380393 LINGO1Q96FE5 620 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 TSPAN17Q96FV3 270 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 CCDC115Q96NT0 180 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 F2RL3Q96RI0 385 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 MRPL45Q9BRJ2 306 aaKnown RBP8.84□□□□□ -1
PTPRA-204ENST00000380393 TMEM208Q9BTX3 173 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 ALG8Q9BVK2 526 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 FXYD6Q9H0Q3 95 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 GSTO2Q9H4Y5 243 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 MAGIXQ9H6Y5 334 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 ENAMQ9NRM1 1142 aa8.84□□□□□ -1
PTPRA-204ENST00000380393 RBBP6Q7Z6E9 1792 aaKnown RBP8.84□□□□□ -1
PTPRA-204ENST00000380393 DUXAA6NLW8 204 aa8.83□□□□□ -1
PTPRA-204ENST00000380393 OR2AT4A6NND4 320 aa8.83□□□□□ -1
PTPRA-204ENST00000380393 CYTIPO60759 359 aa8.83□□□□□ -1
PTPRA-204ENST00000380393 PEPDP12955 493 aa8.83□□□□□ -1
PTPRA-204ENST00000380393 GGT2P36268 569 aa8.83□□□□□ -1
PTPRA-204ENST00000380393 LSM6P62312 80 aaKnown RBP8.83□□□□□ -1
PTPRA-204ENST00000380393 E2F1Q01094 437 aa8.83□□□□□ -1
PTPRA-204ENST00000380393 LY6KQ17RY6 165 aa8.83□□□□□ -1
PTPRA-204ENST00000380393 TMEM255AQ5JRV8 349 aa8.83□□□□□ -1
PTPRA-204ENST00000380393 LPCAT3Q6P1A2 487 aa8.83□□□□□ -1
PTPRA-204ENST00000380393 MTFR2Q6P444 385 aa8.83□□□□□ -1
PTPRA-204ENST00000380393 ACOT1Q86TX2 421 aa8.83□□□□□ -1
PTPRA-204ENST00000380393 FBXO16Q8IX29 292 aaPredicted RBP8.83□□□□□ -1
PTPRA-204ENST00000380393 FAM126BQ8IXS8 530 aa8.83□□□□□ -1
PTPRA-204ENST00000380393 ZNF567Q8N184 647 aa8.83□□□□□ -1
PTPRA-204ENST00000380393 HDDC3Q8N4P3 179 aa8.83□□□□□ -1
PTPRA-204ENST00000380393 ZNF548Q8NEK5 533 aaPredicted RBP8.83□□□□□ -1
PTPRA-204ENST00000380393 OR6J1Q8NGC5 347 aa8.83□□□□□ -1
PTPRA-204ENST00000380393 OR52P1PQ8NH57 321 aa8.83□□□□□ -1
PTPRA-204ENST00000380393 TMEM163Q8TC26 289 aa8.83□□□□□ -1
PTPRA-204ENST00000380393 SLC25A28Q96A46 364 aa8.83□□□□□ -1
PTPRA-204ENST00000380393 KCTD7Q96MP8 289 aa8.83□□□□□ -1
PTPRA-204ENST00000380393 THAP7Q9BT49 309 aaPredicted RBP8.83□□□□□ -1
PTPRA-204ENST00000380393 CDCA4Q9BXL8 241 aa8.83□□□□□ -1
PTPRA-204ENST00000380393 POLR2J2Q9GZM3 115 aaKnown RBP8.83□□□□□ -1
PTPRA-204ENST00000380393 XYLT2Q9H1B5 865 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms