RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 CST1P01037 141 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 CAPNS1P04632 268 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 RAB40ALP0C0E4 278 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 CD247P20963 164 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 KCNJ5P48544 419 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 CHRNEQ04844 493 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 HMBOX1Q6NT76 420 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 FRRS1Q6ZNA5 592 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 CPEB2Q7Z5Q1 589 aaKnown RBP22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 PEX5LQ8IYB4 626 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 ZNF619Q8N2I2 560 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 ESX1Q8N693 406 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 SMYD1Q8NB12 490 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 OR2Y1Q8NGV0 311 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 PIK3R3Q92569 461 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 EME1Q96AY2 570 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 ZNF354BQ96LW1 612 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 ZNF347Q96SE7 839 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 PINK1Q9BXM7 581 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 ITPAQ9BY32 194 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 SAP130Q9H0E3 1048 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 THSD1Q9NS62 852 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 PPIEQ9UNP9 301 aaKnown RBP22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 TMEM229AB2RXF0 380 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 DPM1O60762 260 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 ATP6V1C1P21283 382 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 PEX2P28328 305 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 PPICP45877 212 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 FAAH2Q6GMR7 532 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 TYW3Q6IPR3 259 aaKnown RBP22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 SLC29A4Q7RTT9 530 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 AMIGO2Q86SJ2 522 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 B3GNT7Q8NFL0 401 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 OR10Q1Q8NGQ4 319 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 SEMA6AQ9H2E6 1030 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 MRTO4Q9UKD2 239 aaKnown RBP22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 SLC13A4Q9UKG4 626 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 GPR55Q9Y2T6 319 aaPredicted RBP22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 OR10H1Q9Y4A9 318 aa22.79■■□□□ 1.24
ECHDC3-201ENST00000379215 WDR87Q6ZQQ6 2873 aa22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 SYT5O00445 386 aa22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 GNGT2O14610 69 aa22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 KIAA0513O60268 411 aa22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 PRSS23O95084 383 aa22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 MT-ND1P03886 318 aa22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 FESP07332 822 aa22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 PABPC4LP0CB38 370 aaKnown RBP22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 PRKAR1BP31321 381 aa22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 FOLR3P41439 243 aa22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 GRAMD1BQ3KR37 738 aa22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 CYP27C1Q4G0S4 372 aa22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 HLA-DQA1Q5Y7H0 255 aa22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 FAM199XQ6PEV8 388 aaPredicted RBP22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 C17orf47Q8NEP4 570 aa22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 RMND5BQ96G75 393 aaPredicted RBP22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 C9orf16Q9BUW7 83 aa22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 SPRY4Q9C004 299 aa22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 AKIRIN1Q9H9L7 192 aaPredicted RBP22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 ZNF232Q9UNY5 417 aa22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 SLC9A8Q9Y2E8 581 aa22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 PTRH2Q9Y3E5 179 aaKnown RBP22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 EP300Q09472 2414 aaPredicted RBP22.78■■□□□ 1.24
ECHDC3-201ENST00000379215 FRG2CA6NGY1 282 aa22.77■■□□□ 1.24
ECHDC3-201ENST00000379215 TM4SF5O14894 197 aa22.77■■□□□ 1.24
ECHDC3-201ENST00000379215 KCNK2O95069 426 aa22.77■■□□□ 1.24
ECHDC3-201ENST00000379215 IFNW1P05000 195 aa22.77■■□□□ 1.24
ECHDC3-201ENST00000379215 THBS1P07996 1170 aa22.77■■□□□ 1.24
ECHDC3-201ENST00000379215 CT45A8P0DMV1 189 aa22.77■■□□□ 1.24
ECHDC3-201ENST00000379215 CT45A9P0DMV2 189 aa22.77■■□□□ 1.24
ECHDC3-201ENST00000379215 DRD5P21918 477 aa22.77■■□□□ 1.24
ECHDC3-201ENST00000379215 PIGAP37287 484 aa22.77■■□□□ 1.24
ECHDC3-201ENST00000379215 TARDBPQ13148 414 aaKnown RBP eCLIP22.77■■□□□ 1.24
ECHDC3-201ENST00000379215 LARS2Q15031 903 aaKnown RBP22.77■■□□□ 1.24
ECHDC3-201ENST00000379215 DUSP7Q16829 419 aa22.77■■□□□ 1.24
ECHDC3-201ENST00000379215 CT45A2Q5DJT8 189 aa22.77■■□□□ 1.24
ECHDC3-201ENST00000379215 ZNF311Q5JNZ3 666 aa22.77■■□□□ 1.24
ECHDC3-201ENST00000379215 GALNT15Q8N3T1 639 aa22.77■■□□□ 1.24
ECHDC3-201ENST00000379215 OIT3Q8WWZ8 545 aa22.77■■□□□ 1.24
ECHDC3-201ENST00000379215 C7orf34Q96L11 122 aa22.77■■□□□ 1.24
ECHDC3-201ENST00000379215 NUDT9Q9BW91 350 aa22.77■■□□□ 1.24
ECHDC3-201ENST00000379215 CNOT11Q9UKZ1 510 aaKnown RBP22.77■■□□□ 1.24
ECHDC3-201ENST00000379215 CBLCQ9ULV8 474 aa22.77■■□□□ 1.24
ECHDC3-201ENST00000379215 DTX4Q9Y2E6 619 aa22.77■■□□□ 1.24
ECHDC3-201ENST00000379215 LOC102723996A0A087X1L8 192 aa22.76■■□□□ 1.23
ECHDC3-201ENST00000379215 C2orf92A0A1B0GVN3 265 aa22.76■■□□□ 1.23
ECHDC3-201ENST00000379215 FAM149AA5PLN7 773 aa22.76■■□□□ 1.23
ECHDC3-201ENST00000379215 PCNX2A6NKB5 2137 aa22.76■■□□□ 1.23
ECHDC3-201ENST00000379215 DBIP07108 87 aaKnown RBP22.76■■□□□ 1.23
ECHDC3-201ENST00000379215 PSMD4P55036 377 aaKnown RBP22.76■■□□□ 1.23
ECHDC3-201ENST00000379215 VLDLRP98155 873 aa22.76■■□□□ 1.23
ECHDC3-201ENST00000379215 NHLH1Q02575 133 aa22.76■■□□□ 1.23
ECHDC3-201ENST00000379215 EIPR1Q53HC9 387 aa22.76■■□□□ 1.23
ECHDC3-201ENST00000379215 LPCAT4Q643R3 524 aa22.76■■□□□ 1.23
ECHDC3-201ENST00000379215 PAPD4Q6PIY7 484 aaKnown RBP22.76■■□□□ 1.23
ECHDC3-201ENST00000379215 DHRS4L2Q6PKH6 230 aa22.76■■□□□ 1.23
ECHDC3-201ENST00000379215 NPSR1Q6W5P4 371 aa22.76■■□□□ 1.23
ECHDC3-201ENST00000379215 ICA1LQ8NDH6 482 aa22.76■■□□□ 1.23
ECHDC3-201ENST00000379215 OR52P1PQ8NH57 321 aa22.76■■□□□ 1.23
ECHDC3-201ENST00000379215 VMP1Q96GC9 406 aa22.76■■□□□ 1.23
ECHDC3-201ENST00000379215 VPS50Q96JG6 964 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms