RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 DSN1Q9H410 356 aa16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 ELOVL6Q9H5J4 265 aa16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 CXorf56Q9H5V9 222 aa16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 FARSBQ9NSD9 589 aaKnown RBP16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 UTS2RQ9UKP6 389 aa16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 GPR55Q9Y2T6 319 aaPredicted RBP16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 TNPO3Q9Y5L0 923 aaKnown RBP16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 STAB1Q9NY15 2570 aa16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 TO15178 435 aa16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 GMFGO60234 142 aa16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 PLAUP00749 431 aa16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 TBXA2RP21731 343 aa16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 SUCLG1P53597 346 aaKnown RBP16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 B3GALT5-AS1P59052 145 aa16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 TNK1Q13470 666 aa16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 VEZF1Q14119 521 aa16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 EFR3AQ14156 821 aa16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 ACAP2Q15057 778 aa16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 SH2D4BQ5SQS7 431 aa16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 NPSR1Q6W5P4 371 aa16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 ZNF704Q6ZNC4 412 aaPredicted RBP16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 RPS27LQ71UM5 84 aaKnown RBP16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 CCDC116Q8IYX3 515 aa16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 OR9A2Q8NGT5 310 aa16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 TM4SF18Q96CE8 201 aa16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 CNRIP1Q96F85 164 aaPredicted RBP16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 SLC35A4Q96G79 324 aa16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 HBEGFQ99075 208 aa16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 FAIM2Q9BWQ8 316 aa16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 VPS11Q9H270 941 aa16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 MED11Q9P086 117 aa16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 PSME2Q9UL46 239 aa16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 SAR1BQ9Y6B6 198 aa16.02■□□□□ 0.16
PDLIM4-202ENST00000379018 A0A096LPK6 155 aa16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 EMC8O43402 210 aa16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 ABCB7O75027 752 aa16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 KLHL2O95198 593 aa16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 CGAP01215 116 aa16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 GSTA2P09210 222 aa16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 DSCR4P56555 118 aaPredicted RBP16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 CLDN15P56746 228 aa16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 GNG11P61952 73 aa16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 DMTNQ08495 405 aa16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 TRAF3Q13114 568 aa16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 ERCC6LQ2NKX8 1250 aa16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 C10orf62Q5T681 223 aaPredicted RBP16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 CYS1Q717R9 158 aa16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 WFDC8Q8IUA0 241 aa16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 SLC44A2Q8IWA5 706 aaPredicted RBP16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 OR4N2Q8NGD1 307 aa16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 EXOSC8Q96B26 276 aaKnown RBP16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 WHRNQ9P202 907 aa16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 CLEC4AQ9UMR7 237 aa16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 ZNF337Q9Y3M9 751 aa16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 OR10H1Q9Y4A9 318 aa16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 PRR14LQ5THK1 2151 aa16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 PCNX3Q9H6A9 2034 aa16.01■□□□□ 0.15
PDLIM4-202ENST00000379018 RNF223E7ERA6 249 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 TSPAN2O60636 221 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 THBDP07204 575 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 CT45A8P0DMV1 189 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 CT45A9P0DMV2 189 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 TSPAN8P19075 237 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 EVI2BP34910 448 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 PLTPP55058 493 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 CLDN20P56880 219 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 GALNT1Q10472 559 aaPredicted RBP16■□□□□ 0.15
PDLIM4-202ENST00000379018 ZNF155Q12901 538 aaPredicted RBP16■□□□□ 0.15
PDLIM4-202ENST00000379018 BCL2A1Q16548 175 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 SGCBQ16585 318 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 CT45A2Q5DJT8 189 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 ZNF628Q5EBL2 1059 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 BEX5Q5H9J7 111 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 TECRLQ5HYJ1 363 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 HMBOX1Q6NT76 420 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 MILR1Q7Z6M3 343 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 C1orf52Q8N6N3 182 aaKnown RBP16■□□□□ 0.15
PDLIM4-202ENST00000379018 GBP7Q8N8V2 638 aaPredicted RBP16■□□□□ 0.15
PDLIM4-202ENST00000379018 OR4F6Q8NGB9 312 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 SELENOMQ8WWX9 145 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 PLPPR2Q96GM1 343 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 BTBD9Q96Q07 612 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 ERP44Q9BS26 406 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 FOLH1BQ9HBA9 442 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 ZBTB26Q9HCK0 441 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 GRHL1Q9NZI5 618 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 SENP1Q9P0U3 644 aa16■□□□□ 0.15
PDLIM4-202ENST00000379018 MRPS18CQ9Y3D5 142 aaKnown RBP16■□□□□ 0.15
PDLIM4-202ENST00000379018 RAD51CO43502 376 aa15.99■□□□□ 0.15
PDLIM4-202ENST00000379018 PDYNP01213 254 aa15.99■□□□□ 0.15
PDLIM4-202ENST00000379018 CD8BP10966 210 aa15.99■□□□□ 0.15
PDLIM4-202ENST00000379018 TYK2P29597 1187 aa15.99■□□□□ 0.15
PDLIM4-202ENST00000379018 MAGEA4P43358 317 aa15.99■□□□□ 0.15
PDLIM4-202ENST00000379018 RFX3P48380 749 aa15.99■□□□□ 0.15
PDLIM4-202ENST00000379018 GAS1P54826 345 aa15.99■□□□□ 0.15
PDLIM4-202ENST00000379018 EEFSECP57772 596 aaKnown RBP15.99■□□□□ 0.15
PDLIM4-202ENST00000379018 KRTAP1-1Q07627 177 aa15.99■□□□□ 0.15
PDLIM4-202ENST00000379018 PLD6Q8N2A8 252 aaKnown RBP15.99■□□□□ 0.15
PDLIM4-202ENST00000379018 OR2M3Q8NG83 312 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms