RNA–Protein interactions for RNA: ENST00000378839.1

CCDC3-202, Transcript of coiled-coil domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC3, Length 3,180 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC3-202ENST00000378839 PIP5K1CO60331 668 aa12.52□□□□□ -0.41
CCDC3-202ENST00000378839 CYP7B1O75881 506 aa12.52□□□□□ -0.41
CCDC3-202ENST00000378839 CTSBP07858 339 aa12.52□□□□□ -0.41
CCDC3-202ENST00000378839 NR2F6P10588 404 aa12.52□□□□□ -0.41
CCDC3-202ENST00000378839 PVRP15151 417 aa12.52□□□□□ -0.41
CCDC3-202ENST00000378839 ACTR1BP42025 376 aa12.52□□□□□ -0.41
CCDC3-202ENST00000378839 OMPP47874 163 aa12.52□□□□□ -0.41
CCDC3-202ENST00000378839 KIAA1024LP59773 190 aa12.52□□□□□ -0.41
CCDC3-202ENST00000378839 ACTR1AP61163 376 aa12.52□□□□□ -0.41
CCDC3-202ENST00000378839 TRMT12Q53H54 448 aaKnown RBP12.52□□□□□ -0.41
CCDC3-202ENST00000378839 CCNJQ5T5M9 372 aa12.52□□□□□ -0.41
CCDC3-202ENST00000378839 MRPL38Q96DV4 380 aaKnown RBP12.52□□□□□ -0.41
CCDC3-202ENST00000378839 PHOX2BQ99453 314 aa12.52□□□□□ -0.41
CCDC3-202ENST00000378839 FBXO34Q9NWN3 711 aa12.52□□□□□ -0.41
CCDC3-202ENST00000378839 GIN1Q9NXP7 522 aa12.52□□□□□ -0.41
CCDC3-202ENST00000378839 YARS2Q9Y2Z4 477 aaKnown RBP12.52□□□□□ -0.41
CCDC3-202ENST00000378839 RASGRP1O95267 797 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 CELA2BP08218 269 aaPredicted RBP12.51□□□□□ -0.41
CCDC3-202ENST00000378839 UGT2B7P16662 529 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 POLR2CP19387 275 aaPredicted RBP12.51□□□□□ -0.41
CCDC3-202ENST00000378839 SMIM11AP58511 58 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 ALG11Q2TAA5 492 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 CLEC12AQ5QGZ9 265 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 HEPHL1Q6MZM0 1159 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 MFSD12Q6NUT3 480 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 KBTBD8Q8NFY9 601 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 NT5CQ8TCD5 201 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 TRNT1Q96Q11 434 aaKnown RBP12.51□□□□□ -0.41
CCDC3-202ENST00000378839 SAP130Q9H0E3 1048 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 LMAN2LQ9H0V9 348 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 ANKHQ9HCJ1 492 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 IL20RAQ9UHF4 553 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 PILRAQ9UKJ1 303 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 FANCMQ8IYD8 2048 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 CASC3O15234 703 aaKnown RBP12.51□□□□□ -0.41
CCDC3-202ENST00000378839 SSX4O60224 188 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 NDUFV2P19404 249 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 TAS2R41P59536 307 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 STXBP1P61764 594 aaKnown RBP12.51□□□□□ -0.41
CCDC3-202ENST00000378839 PPP1CAP62136 330 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 PRR5P85299 388 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 TGM3Q08188 693 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 GPR18Q14330 331 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 OR2G6Q5TZ20 316 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 MEDAGQ5VYS4 303 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 AMER2Q8N7J2 671 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 TM9SF4Q92544 642 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 GAL3ST3Q96A11 431 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 PCOLCE2Q9UKZ9 415 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 LIPT1Q9Y234 373 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 RPL36Q9Y3U8 105 aaKnown RBP12.51□□□□□ -0.41
CCDC3-202ENST00000378839 ZNF780BQ9Y6R6 833 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 ARHGEF17Q96PE2 2063 aaPredicted RBP12.51□□□□□ -0.41
CCDC3-202ENST00000378839 ALPPP05187 535 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 ENDOUP21128 410 aaKnown RBP12.51□□□□□ -0.41
CCDC3-202ENST00000378839 TSFMP43897 325 aaKnown RBP12.51□□□□□ -0.41
CCDC3-202ENST00000378839 ARFIP1P53367 373 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 TNFRSF17Q02223 184 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 COX10Q12887 443 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 DUSP5Q16690 384 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 SLC25A30Q5SVS4 291 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 LIPKQ5VXJ0 399 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 TYW3Q6IPR3 259 aaKnown RBP12.51□□□□□ -0.41
CCDC3-202ENST00000378839 PHC2Q8IXK0 858 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 OR5T3Q8NGG3 340 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 OR4Q3Q8NH05 313 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 OR10G6Q8NH81 332 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 CAPSLQ8WWF8 208 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 C1QTNF7Q9BXJ2 289 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 ACTRT3Q9BYD9 372 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 KCNE5Q9UJ90 142 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 A3GALT2U3KPV4 340 aa12.51□□□□□ -0.41
CCDC3-202ENST00000378839 FAM170BA6NMN3 283 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 PLD2O14939 933 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 KCNK2O95069 426 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 ACP2P11117 423 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 SRSF5Q13243 272 aaKnown RBP12.5□□□□□ -0.41
CCDC3-202ENST00000378839 HTR4Q13639 388 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 MAPK14Q16539 360 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 FAM92BQ6ZTR7 304 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 MRGPREQ86SM8 312 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 TMEM255BQ8WV15 326 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 SPATA5L1Q9BVQ7 753 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 ANKMY1Q9P2S6 941 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 HEBP2Q9Y5Z4 205 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 OR6C74A6NCV1 312 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 GUCY1B2O75343 617 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 HOXC4P09017 264 aaPredicted RBP12.5□□□□□ -0.41
CCDC3-202ENST00000378839 PRG2P13727 222 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 FUT1P19526 365 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 GPR4P46093 362 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 RPS15AP62244 130 aaKnown RBP12.5□□□□□ -0.41
CCDC3-202ENST00000378839 ADAM15Q13444 863 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 SF3B4Q15427 424 aaKnown RBP eCLIP12.5□□□□□ -0.41
CCDC3-202ENST00000378839 SNAPC1Q16533 368 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 BHLHB9Q6PI77 547 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 SLC22A18ASQ8N1D0 253 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 OR52P1PQ8NH57 321 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 SLC9A6Q92581 669 aa12.5□□□□□ -0.41
CCDC3-202ENST00000378839 HTRA1Q92743 480 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms