RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 RBBP4Q09028 425 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 PDK3Q15120 406 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 PDZK1Q5T2W1 519 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 FAM219BQ5XKK7 198 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 ENPP6Q6UWR7 440 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 ENDOVQ8N8Q3 282 aaKnown RBP7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 OR8J3Q8NGG0 315 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 GPR78Q96P69 363 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 OSBPL11Q9BXB4 747 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 SPNS1Q9H2V7 528 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 POMT2Q9UKY4 750 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 CBLCQ9ULV8 474 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 DAPP1Q9UN19 280 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 A0A087WXM4 84 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 SMIM31A0A1B0GVY4 71 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 A0A1W2PRG6 482 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 PSMD9O00233 223 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 ARHGEF9O43307 516 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 AK1P00568 194 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 NR4A1P22736 598 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 TALDO1P37837 337 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 GPR3P46089 330 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 RAB15P59190 212 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 STK11Q15831 433 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 TRMT12Q53H54 448 aaKnown RBP7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 ATCAYQ86WG3 371 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 CACTIN-AS1Q8N1I8 211 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 GALNT15Q8N3T1 639 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 OR5K1Q8NHB7 308 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 GPBAR1Q8TDU6 330 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 TSEN15Q8WW01 171 aaKnown RBP7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 ARSGQ96EG1 525 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 ERMAPQ96PL5 475 aaPredicted RBP7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 CCDC106Q9BWC9 280 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 USP36Q9P275 1121 aaKnown RBP7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 GSTK1Q9Y2Q3 226 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 GPR45Q9Y5Y3 372 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 COMMD3-BMI1R4GMX3 469 aa7.94□□□□□ -1.14
CRNKL1-202ENST00000377340 ABCA4P78363 2273 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 MYO18BQ8IUG5 2567 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 A0A1W2PPL8 197 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 UGT2B11O75310 529 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 HOXB3P14651 431 aaPredicted RBP7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 SOX6P35712 828 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 IST1P53990 364 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 LIM2P55344 173 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 VLDLRP98155 873 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 TPRG1LQ5T0D9 272 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 DCST2Q5T1A1 773 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 ZCCHC12Q6PEW1 402 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 TM4SF18Q96CE8 201 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 VWCEQ96DN2 955 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 PLGRKTQ9HBL7 147 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 CTSFQ9UBX1 484 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 TSPAN11A1L157 253 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 FAM166BA8MTA8 275 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 MAGEB3O15480 346 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 TMPRSS11DO60235 418 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 SSR4P51571 173 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 RHDQ02161 417 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 HSF2Q03933 536 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 GAS6Q14393 721 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 LIN52Q52LA3 116 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 SLC16A11Q8NCK7 471 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 C7orf57Q8NEG2 295 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 FBXO27Q8NI29 283 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 ASB12Q8WXK4 309 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 LINC00615Q96LM1 132 aaPredicted RBP7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 PHOX2BQ99453 314 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 PAPOLBQ9NRJ5 636 aaKnown RBP7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 FAM53CQ9NYF3 392 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 NEU3Q9UQ49 428 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 PTPRQQ9UMZ3 2332 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 CEP350Q5VT06 3117 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 hCG_2014768A0A024R1R8 64 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 A0A1W2PR48 441 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 LILRA5A6NI73 299 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 STMND1H3BQB6 276 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 SULT2B1O00204 365 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 NME4O00746 187 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 PFDN1O60925 122 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 NPPAP01160 153 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 HOXB6P17509 224 aaKnown RBP7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 CYB561P49447 251 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 CHRNEQ04844 493 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 PON3Q15166 354 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 MAPK14Q16539 360 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 CARTPTQ16568 116 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 DDI2Q5TDH0 399 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 C9orf135Q5VTT2 229 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 PRAMEF8Q5VWM4 474 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 PRAMEF7Q5VXH5 474 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 OGFOD2Q6N063 350 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 THAP5Q7Z6K1 395 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 OR14A16Q8NHC5 309 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 UCK2Q9BZX2 261 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 GLIPR2Q9H4G4 154 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 CAMK2AQ9UQM7 478 aa7.93□□□□□ -1.14
CRNKL1-202ENST00000377340 A0A1B0GTL3 188 aa7.92□□□□□ -1.14
CRNKL1-202ENST00000377340 TEX51A0A1B0GUA7 166 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms