RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 IL18BPO95998 194 aa19.12■□□□□ 0.65
VSX1-201ENST00000376707 SRD5A2P31213 254 aa19.12■□□□□ 0.65
VSX1-201ENST00000376707 MRPS22P82650 360 aaKnown RBP19.12■□□□□ 0.65
VSX1-201ENST00000376707 ZNF763Q0D2J5 394 aa19.12■□□□□ 0.65
VSX1-201ENST00000376707 IMPG1Q17R60 797 aa19.12■□□□□ 0.65
VSX1-201ENST00000376707 FBXW10Q5XX13 1052 aa19.12■□□□□ 0.65
VSX1-201ENST00000376707 AAGABQ6PD74 315 aa19.12■□□□□ 0.65
VSX1-201ENST00000376707 NPSR1Q6W5P4 371 aa19.12■□□□□ 0.65
VSX1-201ENST00000376707 TRIM46Q7Z4K8 759 aa19.12■□□□□ 0.65
VSX1-201ENST00000376707 SLC44A2Q8IWA5 706 aaPredicted RBP19.12■□□□□ 0.65
VSX1-201ENST00000376707 OR7G2Q8NG99 324 aa19.12■□□□□ 0.65
VSX1-201ENST00000376707 EPS8L3Q8TE67 593 aaKnown RBP19.12■□□□□ 0.65
VSX1-201ENST00000376707 STMN4Q9H169 189 aaPredicted RBP19.12■□□□□ 0.65
VSX1-201ENST00000376707 MIEF1Q9NQG6 463 aa19.12■□□□□ 0.65
VSX1-201ENST00000376707 OXSMQ9NWU1 459 aa19.12■□□□□ 0.65
VSX1-201ENST00000376707 ST6GALNAC2Q9UJ37 374 aa19.12■□□□□ 0.65
VSX1-201ENST00000376707 DKKL1Q9UK85 242 aa19.12■□□□□ 0.65
VSX1-201ENST00000376707 FBXL2Q9UKC9 423 aa19.12■□□□□ 0.65
VSX1-201ENST00000376707 OR10H1Q9Y4A9 318 aa19.12■□□□□ 0.65
VSX1-201ENST00000376707 COQ9O75208 318 aa19.11■□□□□ 0.65
VSX1-201ENST00000376707 DDCP20711 480 aa19.11■□□□□ 0.65
VSX1-201ENST00000376707 PNLIPRP2P54317 469 aa19.11■□□□□ 0.65
VSX1-201ENST00000376707 GFRA1P56159 465 aa19.11■□□□□ 0.65
VSX1-201ENST00000376707 C2orf80Q0P641 193 aa19.11■□□□□ 0.65
VSX1-201ENST00000376707 ZNF155Q12901 538 aaPredicted RBP19.11■□□□□ 0.65
VSX1-201ENST00000376707 OR5M10Q6IEU7 315 aa19.11■□□□□ 0.65
VSX1-201ENST00000376707 CDC20BQ86Y33 519 aa19.11■□□□□ 0.65
VSX1-201ENST00000376707 EFHD2Q96C19 240 aaPredicted RBP19.11■□□□□ 0.65
VSX1-201ENST00000376707 SFXN2Q96NB2 322 aa19.11■□□□□ 0.65
VSX1-201ENST00000376707 ZFP3Q96NJ6 502 aa19.11■□□□□ 0.65
VSX1-201ENST00000376707 TM9SF2Q99805 663 aa19.11■□□□□ 0.65
VSX1-201ENST00000376707 FOXC2Q99958 501 aa19.11■□□□□ 0.65
VSX1-201ENST00000376707 LIME1Q9H400 295 aa19.11■□□□□ 0.65
VSX1-201ENST00000376707 ANKHD1Q8IWZ3 2542 aaKnown RBP19.1■□□□□ 0.65
VSX1-201ENST00000376707 COPEO14579 308 aa19.1■□□□□ 0.65
VSX1-201ENST00000376707 CRCPO75575 148 aa19.1■□□□□ 0.65
VSX1-201ENST00000376707 CPA3P15088 417 aa19.1■□□□□ 0.65
VSX1-201ENST00000376707 KRT4P19013 534 aa19.1■□□□□ 0.65
VSX1-201ENST00000376707 GRK2P25098 689 aa19.1■□□□□ 0.65
VSX1-201ENST00000376707 STARP49675 285 aa19.1■□□□□ 0.65
VSX1-201ENST00000376707 NCBP2P52298 156 aaKnown RBP eCLIP19.1■□□□□ 0.65
VSX1-201ENST00000376707 SORDQ00796 357 aa19.1■□□□□ 0.65
VSX1-201ENST00000376707 SLC18A2Q05940 514 aa19.1■□□□□ 0.65
VSX1-201ENST00000376707 FOXF2Q12947 444 aa19.1■□□□□ 0.65
VSX1-201ENST00000376707 DAZAP2Q15038 168 aaPredicted RBP19.1■□□□□ 0.65
VSX1-201ENST00000376707 FAM76AQ8TAV0 307 aa19.1■□□□□ 0.65
VSX1-201ENST00000376707 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.1■□□□□ 0.65
VSX1-201ENST00000376707 WNT2BQ93097 391 aa19.1■□□□□ 0.65
VSX1-201ENST00000376707 SFXN3Q9BWM7 321 aa19.1■□□□□ 0.65
VSX1-201ENST00000376707 ANKZF1Q9H8Y5 726 aa19.1■□□□□ 0.65
VSX1-201ENST00000376707 JKAMPQ9P055 326 aa19.1■□□□□ 0.65
VSX1-201ENST00000376707 SMIM23A6NLE4 172 aa19.09■□□□□ 0.65
VSX1-201ENST00000376707 CLCA1A8K7I4 914 aa19.09■□□□□ 0.65
VSX1-201ENST00000376707 MYO1GB0I1T2 1018 aa19.09■□□□□ 0.65
VSX1-201ENST00000376707 RCBTB2O95199 551 aa19.09■□□□□ 0.65
VSX1-201ENST00000376707 JUNP05412 331 aaKnown RBP19.09■□□□□ 0.65
VSX1-201ENST00000376707 EPXP11678 715 aa19.09■□□□□ 0.65
VSX1-201ENST00000376707 TCEA1P23193 301 aaKnown RBP19.09■□□□□ 0.65
VSX1-201ENST00000376707 DNASE1P24855 282 aa19.09■□□□□ 0.65
VSX1-201ENST00000376707 CFAP157Q5JU67 520 aa19.09■□□□□ 0.65
VSX1-201ENST00000376707 SH2D4BQ5SQS7 431 aa19.09■□□□□ 0.65
VSX1-201ENST00000376707 CHDHQ8NE62 594 aaPredicted RBP19.09■□□□□ 0.65
VSX1-201ENST00000376707 OR4K17Q8NGC6 315 aa19.09■□□□□ 0.65
VSX1-201ENST00000376707 OR4N2Q8NGD1 307 aa19.09■□□□□ 0.65
VSX1-201ENST00000376707 RBM24Q9BX46 236 aaKnown RBP19.09■□□□□ 0.65
VSX1-201ENST00000376707 CXXC4Q9H2H0 198 aa19.09■□□□□ 0.65
VSX1-201ENST00000376707 C12orf65Q9H3J6 166 aaKnown RBP19.09■□□□□ 0.65
VSX1-201ENST00000376707 ACBD3Q9H3P7 528 aa19.09■□□□□ 0.65
VSX1-201ENST00000376707 TNFRSF12AQ9NP84 129 aa19.09■□□□□ 0.65
VSX1-201ENST00000376707 TAS2R7Q9NYW3 318 aa19.09■□□□□ 0.65
VSX1-201ENST00000376707 PLEKHA6Q9Y2H5 1048 aa19.09■□□□□ 0.65
VSX1-201ENST00000376707 RPH3AQ9Y2J0 694 aaPredicted RBP19.09■□□□□ 0.65
VSX1-201ENST00000376707 WBP11Q9Y2W2 641 aaKnown RBP19.09■□□□□ 0.65
VSX1-201ENST00000376707 MRPS18CQ9Y3D5 142 aaKnown RBP19.09■□□□□ 0.65
VSX1-201ENST00000376707 KIAA1549Q9HCM3 1950 aa19.08■□□□□ 0.65
VSX1-201ENST00000376707 A0A087WV62 115 aa19.08■□□□□ 0.64
VSX1-201ENST00000376707 PLOD2O00469 737 aa19.08■□□□□ 0.64
VSX1-201ENST00000376707 RSL1D1O76021 490 aaKnown RBP19.08■□□□□ 0.64
VSX1-201ENST00000376707 SLITRK5O94991 958 aa19.08■□□□□ 0.64
VSX1-201ENST00000376707 UROSP10746 265 aa19.08■□□□□ 0.64
VSX1-201ENST00000376707 CHMP24386 653 aa19.08■□□□□ 0.64
VSX1-201ENST00000376707 DPP4P27487 766 aa19.08■□□□□ 0.64
VSX1-201ENST00000376707 NTSP30990 170 aa19.08■□□□□ 0.64
VSX1-201ENST00000376707 MC3RP41968 323 aa19.08■□□□□ 0.64
VSX1-201ENST00000376707 CPA2P48052 419 aa19.08■□□□□ 0.64
VSX1-201ENST00000376707 LHX2P50458 406 aa19.08■□□□□ 0.64
VSX1-201ENST00000376707 LIPMQ5VYY2 423 aa19.08■□□□□ 0.64
VSX1-201ENST00000376707 TMEM107Q6UX40 140 aa19.08■□□□□ 0.64
VSX1-201ENST00000376707 ADGRE4PQ86SQ3 457 aa19.08■□□□□ 0.64
VSX1-201ENST00000376707 LUZP2Q86TE4 346 aa19.08■□□□□ 0.64
VSX1-201ENST00000376707 LINC01560Q8TB33 94 aa19.08■□□□□ 0.64
VSX1-201ENST00000376707 INTS12Q96CB8 462 aaKnown RBP19.08■□□□□ 0.64
VSX1-201ENST00000376707 METTL2AQ96IZ6 378 aaKnown RBP19.08■□□□□ 0.64
VSX1-201ENST00000376707 UCN2Q96RP3 112 aa19.08■□□□□ 0.64
VSX1-201ENST00000376707 MYNNQ9NPC7 610 aa19.08■□□□□ 0.64
VSX1-201ENST00000376707 PPP4R1LQ9P1A2 415 aa19.08■□□□□ 0.64
VSX1-201ENST00000376707 CCL27Q9Y4X3 112 aa19.08■□□□□ 0.64
VSX1-201ENST00000376707 POLR3HQ9Y535 204 aaPredicted RBP19.08■□□□□ 0.64
VSX1-201ENST00000376707 C2CD3Q4AC94 2353 aa19.07■□□□□ 0.64
VSX1-201ENST00000376707 MED13LQ71F56 2210 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms