RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 GTPBP2Q9BX10 602 aaKnown RBP6.19□□□□□ -1.42
SMC1A-202ENST00000375340 SLC2A11Q9BYW1 496 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 SYNPO2LQ9H987 977 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 THSD1Q9NS62 852 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 USP36Q9P275 1121 aaKnown RBP6.19□□□□□ -1.42
SMC1A-202ENST00000375340 DBIP07108 87 aaKnown RBP6.19□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF823P16415 610 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 JUNBP17275 347 aaPredicted RBP6.19□□□□□ -1.42
SMC1A-202ENST00000375340 CEBPBP17676 345 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 NDUFV2P19404 249 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 CLDN2P57739 230 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 ILF3Q12906 894 aaKnown RBP eCLIP6.19□□□□□ -1.421e-6■■■■□ 23.3
SMC1A-202ENST00000375340 DHCR24Q15392 516 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 OR4K14Q8NGD5 310 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 RHOXF1Q8NHV9 184 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 FOXN4Q96NZ1 517 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 SLC22A12Q96S37 553 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 SLC6A15Q9H2J7 730 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 SLC6A13Q9NSD5 602 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 NOP16Q9Y3C1 178 aaKnown RBP6.19□□□□□ -1.42
SMC1A-202ENST00000375340 AK6Q9Y3D8 172 aaKnown RBP6.19□□□□□ -1.42
SMC1A-202ENST00000375340 UGDHO60701 494 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 PLGP00747 810 aaPredicted RBP6.19□□□□□ -1.42
SMC1A-202ENST00000375340 PON3Q15166 354 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 TBCEQ15813 527 aaPredicted RBP6.19□□□□□ -1.42
SMC1A-202ENST00000375340 PRSS36Q5K4E3 855 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 KLHDC8AQ8IYD2 350 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 BOLLQ8N9W6 283 aaKnown RBP6.19□□□□□ -1.42
SMC1A-202ENST00000375340 CASTOR1Q8WTX7 329 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 CREB3L1Q96BA8 519 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 SAP130Q9H0E3 1048 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 CENPMQ9NSP4 180 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 COPS7AQ9UBW8 275 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 MSRAQ9UJ68 235 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 SOX30O94993 753 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 PITPNBP48739 271 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 SERPINA12Q8IW75 414 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 DNAJC5GQ8N7S2 189 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 OR2AJ1Q8NGZ0 328 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 LILRB4Q8NHJ6 448 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 TMEM163Q8TC26 289 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 NEK7Q8TDX7 302 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 TRIM43Q96BQ3 446 aaPredicted RBP6.18□□□□□ -1.42
SMC1A-202ENST00000375340 SLC38A3Q99624 504 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 POLDIP3Q9BY77 421 aaKnown RBP6.18□□□□□ -1.42
SMC1A-202ENST00000375340 ABCG5Q9H222 651 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 C11orf49Q9H6J7 331 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 IL21RQ9HBE5 538 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 TREM1Q9NP99 234 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 ZFC3H1O60293 1989 aaKnown RBP6.18□□□□□ -1.42
SMC1A-202ENST00000375340 TRIP12Q14669 1992 aaPredicted RBP6.18□□□□□ -1.42
SMC1A-202ENST00000375340 TDRD15B5MCY1 1934 aaKnown RBP6.18□□□□□ -1.42
SMC1A-202ENST00000375340 TEX13CA0A0J9YWL9 993 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 FAM183AA6NL82 134 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 ADH1BP00325 375 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 PEPDP12955 493 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 SIM1P81133 766 aaPredicted RBP6.18□□□□□ -1.42
SMC1A-202ENST00000375340 SHC2P98077 582 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 GAB1Q13480 694 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 SEC23BQ15437 767 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF542PQ5EBM4 170 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF527Q8NB42 609 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 INO80EQ8NBZ0 244 aaPredicted RBP6.18□□□□□ -1.42
SMC1A-202ENST00000375340 ZMYND19Q96E35 227 aaPredicted RBP6.18□□□□□ -1.42
SMC1A-202ENST00000375340 THAP7Q9BT49 309 aaPredicted RBP6.18□□□□□ -1.42
SMC1A-202ENST00000375340 P2RY12Q9H244 342 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 FN3KQ9H479 309 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 RETREG1Q9H6L5 497 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 NUDT15Q9NV35 164 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 SNX11Q9Y5W9 270 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 PFN3P60673 137 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 CD300CQ08708 224 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 SLC14A2Q15849 920 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 LEG1Q6P5S2 330 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 PARS2Q7L3T8 475 aaKnown RBP6.18□□□□□ -1.42
SMC1A-202ENST00000375340 ITPKCQ96DU7 683 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 CLSTN3Q9BQT9 956 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 TMEM185BQ9H7F4 350 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 PELI2Q9HAT8 420 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 CLEC4EQ9ULY5 219 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF443Q9Y2A4 671 aaPredicted RBP6.18□□□□□ -1.42
SMC1A-202ENST00000375340 A0A1W2PPL8 197 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 COQ9O75208 318 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 GAS6Q14393 721 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 EIF4HQ15056 248 aaKnown RBP6.18□□□□□ -1.42
SMC1A-202ENST00000375340 ITPRIPL2Q3MIP1 535 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 CCNJQ5T5M9 372 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 CARD17Q5XLA6 110 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 C17orf99Q6UX52 265 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 SDR16C5Q8N3Y7 309 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 GDPD1Q8N9F7 314 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 THAP4Q8WY91 577 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 METTL8Q9H825 291 aaKnown RBP6.18□□□□□ -1.42
SMC1A-202ENST00000375340 TAS2R10Q9NYW0 307 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 HSFX1Q9UBD0 423 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 RWDD3Q9Y3V2 267 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 ZC3H12DA2A288 527 aaKnown RBP6.18□□□□□ -1.42
SMC1A-202ENST00000375340 GABRPO00591 440 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 HLA-FP30511 346 aa6.18□□□□□ -1.42
SMC1A-202ENST00000375340 VEZF1Q14119 521 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms