RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 CHRM4P08173 479 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 TFPIP10646 304 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 GJA1P17302 382 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 STOMP27105 288 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 MTNR1BP49286 362 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 TAS2R41P59536 307 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 MLLT1Q03111 559 aaPredicted RBP19.85■□□□□ 0.77
UPF3A-202ENST00000375299 MLC1Q15049 377 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 POM121L1PQ3SYA9 428 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 NR2C2APQ86WQ0 139 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 KLBQ86Z14 1044 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 SLC39A11Q8N1S5 342 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 ANKRD53Q8N9V6 530 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 ZNF680Q8NEM1 530 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 SCMH1Q96GD3 660 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 FAM46AQ96IP4 442 aaKnown RBP19.85■□□□□ 0.77
UPF3A-202ENST00000375299 ENAMQ9NRM1 1142 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 ZCCHC3Q9NUD5 404 aaKnown RBP19.85■□□□□ 0.77
UPF3A-202ENST00000375299 IMP3Q9NV31 184 aaKnown RBP19.85■□□□□ 0.77
UPF3A-202ENST00000375299 MOSPD1Q9UJG1 213 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 LIPT1Q9Y234 373 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 NEDD8-MDP1E9PL57 170 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 NRG2O14511 850 aaPredicted RBP19.84■□□□□ 0.77
UPF3A-202ENST00000375299 RGS9O75916 674 aaPredicted RBP19.84■□□□□ 0.77
UPF3A-202ENST00000375299 WEE1P30291 646 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 BTCP35070 178 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 TALDO1P37837 337 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 MMP12P39900 470 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 KHKP50053 298 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 HBMQ6B0K9 141 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 OR11H7Q8NGC8 314 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 OR4Q3Q8NH05 313 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 ZNF764Q96H86 408 aaPredicted RBP19.84■□□□□ 0.77
UPF3A-202ENST00000375299 OR2AG1Q9H205 316 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 GHITMQ9H3K2 345 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 ZNF222Q9UK12 451 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 ZFR2Q9UPR6 939 aaKnown RBP19.84■□□□□ 0.77
UPF3A-202ENST00000375299 CACNG2Q9Y698 323 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 CASC3O15234 703 aaKnown RBP19.84■□□□□ 0.77
UPF3A-202ENST00000375299 SURF4O15260 269 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 TMPRSS11DO60235 418 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 PRKACBP22694 351 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 TRIM23P36406 574 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 RGS1Q08116 209 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 IKZF1Q13422 519 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 SLC30A6Q6NXT4 461 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 ZNF322Q6U7Q0 402 aaPredicted RBP19.84■□□□□ 0.77
UPF3A-202ENST00000375299 ADIPOR2Q86V24 386 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 NUDT13Q86X67 352 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 OR8H3Q8N146 312 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 SUN3Q8TAQ9 357 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 LRRC20Q8TCA0 184 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 OMA1Q96E52 524 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 PINK1Q9BXM7 581 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 OSGEPL1Q9H4B0 414 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 LHX9Q9NQ69 397 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 SLCO1C1Q9NYB5 712 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 PTGFRNQ9P2B2 879 aa19.84■□□□□ 0.77
UPF3A-202ENST00000375299 PDGFAP04085 211 aa19.83■□□□□ 0.77
UPF3A-202ENST00000375299 TPOP07202 933 aa19.83■□□□□ 0.77
UPF3A-202ENST00000375299 GNSP15586 552 aa19.83■□□□□ 0.77
UPF3A-202ENST00000375299 RBMS1P29558 406 aaKnown RBP19.83■□□□□ 0.77
UPF3A-202ENST00000375299 FUT5Q11128 374 aa19.83■□□□□ 0.77
UPF3A-202ENST00000375299 CDONQ4KMG0 1287 aa19.83■□□□□ 0.77
UPF3A-202ENST00000375299 NRSN1Q8IZ57 195 aa19.83■□□□□ 0.77
UPF3A-202ENST00000375299 ZNF558Q96NG5 402 aa19.83■□□□□ 0.77
UPF3A-202ENST00000375299 CAMK1GQ96NX5 476 aa19.83■□□□□ 0.77
UPF3A-202ENST00000375299 ZDHHC5Q9C0B5 715 aa19.83■□□□□ 0.77
UPF3A-202ENST00000375299 KCNN2Q9H2S1 579 aa19.83■□□□□ 0.77
UPF3A-202ENST00000375299 GLIPR2Q9H4G4 154 aa19.83■□□□□ 0.77
UPF3A-202ENST00000375299 ITM2BQ9Y287 266 aa19.83■□□□□ 0.77
UPF3A-202ENST00000375299 TRAV6A0A075B6T7 132 aa19.83■□□□□ 0.76
UPF3A-202ENST00000375299 RNF13O43567 381 aa19.83■□□□□ 0.76
UPF3A-202ENST00000375299 RAF1P04049 648 aa19.83■□□□□ 0.76
UPF3A-202ENST00000375299 EIF4EP06730 217 aaKnown RBP19.83■□□□□ 0.76
UPF3A-202ENST00000375299 AHCYP23526 432 aa19.83■□□□□ 0.76
UPF3A-202ENST00000375299 ACADLP28330 430 aa19.83■□□□□ 0.76
UPF3A-202ENST00000375299 RFX3P48380 749 aa19.83■□□□□ 0.76
UPF3A-202ENST00000375299 NOGQ13253 232 aa19.83■□□□□ 0.76
UPF3A-202ENST00000375299 GRIN2CQ14957 1233 aa19.83■□□□□ 0.76
UPF3A-202ENST00000375299 TRAM2Q15035 370 aa19.83■□□□□ 0.76
UPF3A-202ENST00000375299 NTRK2Q16620 822 aa19.83■□□□□ 0.76
UPF3A-202ENST00000375299 ARHGAP15Q53QZ3 475 aa19.83■□□□□ 0.76
UPF3A-202ENST00000375299 ZNF805Q5CZA5 627 aa19.83■□□□□ 0.76
UPF3A-202ENST00000375299 GLRX5Q86SX6 157 aa19.83■□□□□ 0.76
UPF3A-202ENST00000375299 C17orf64Q86WR6 236 aa19.83■□□□□ 0.76
UPF3A-202ENST00000375299 ZNF655Q8N720 491 aaPredicted RBP19.83■□□□□ 0.76
UPF3A-202ENST00000375299 VN1R2Q8NFZ6 395 aa19.83■□□□□ 0.76
UPF3A-202ENST00000375299 AIF1LQ9BQI0 150 aa19.83■□□□□ 0.76
UPF3A-202ENST00000375299 ZCCHC2Q9C0B9 1178 aaKnown RBP19.83■□□□□ 0.76
UPF3A-202ENST00000375299 PTTG3PQ9NZH4 202 aa19.83■□□□□ 0.76
UPF3A-202ENST00000375299 IL36AQ9UHA7 158 aa19.83■□□□□ 0.76
UPF3A-202ENST00000375299 FGBP02675 491 aa19.82■□□□□ 0.76
UPF3A-202ENST00000375299 ANXA3P12429 323 aa19.82■□□□□ 0.76
UPF3A-202ENST00000375299 HTR1FP30939 366 aa19.82■□□□□ 0.76
UPF3A-202ENST00000375299 OMPP47874 163 aa19.82■□□□□ 0.76
UPF3A-202ENST00000375299 FZD5Q13467 585 aa19.82■□□□□ 0.76
UPF3A-202ENST00000375299 IL20RBQ6UXL0 311 aa19.82■□□□□ 0.76
UPF3A-202ENST00000375299 BPHLQ86WA6 291 aaPredicted RBP19.82■□□□□ 0.76
UPF3A-202ENST00000375299 BBS1Q8NFJ9 593 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms