RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 FBXO32Q969P5 355 aa19.38■□□□□ 0.69
TMEFF1-201ENST00000374879 WRAP53Q9BUR4 548 aaKnown RBP19.38■□□□□ 0.69
TMEFF1-201ENST00000374879 RSPO3Q9BXY4 272 aaPredicted RBP19.38■□□□□ 0.69
TMEFF1-201ENST00000374879 MVB12BQ9H7P6 319 aa19.38■□□□□ 0.69
TMEFF1-201ENST00000374879 MRPS18AQ9NVS2 196 aaKnown RBP19.38■□□□□ 0.69
TMEFF1-201ENST00000374879 CLEC4AQ9UMR7 237 aa19.38■□□□□ 0.69
TMEFF1-201ENST00000374879 RASD1Q9Y272 281 aa19.38■□□□□ 0.69
TMEFF1-201ENST00000374879 ETHE1O95571 254 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 WNT1P04628 370 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 THBS2P35442 1172 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 OR1G1P47890 313 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 LRRC74AQ0VAA2 488 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 COL19A1Q14993 1142 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 SLC5A12Q1EHB4 618 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 MTFR2Q6P444 385 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 NSMAFQ92636 917 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 ASB8Q9H765 288 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 OR6C65A6NJZ3 312 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 FAAHO00519 579 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 RNASET2O00584 256 aaKnown RBP19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 SLC28A2O43868 658 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 SDC3O75056 442 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 ASGR1P07306 291 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 CYBAP13498 195 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 CD22P20273 847 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 ERVK-25P63136 954 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 RPS26P11Q5JNZ5 115 aaPredicted RBP19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 CXorf57Q6NSI4 855 aaKnown RBP19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 GLB1LQ6UWU2 654 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 ZER1Q7Z7L7 766 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 PDZD9Q8IXQ8 264 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 MRPS31Q92665 395 aaKnown RBP19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 ZFP3Q96NJ6 502 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 NKX6-2Q9C056 277 aaPredicted RBP19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 C20orf85Q9H1P6 137 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 CA10Q9NS85 328 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 FBXW2Q9UKT8 454 aa19.37■□□□□ 0.69
TMEFF1-201ENST00000374879 PRODHO43272 600 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 FZD7O75084 574 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 RPLP2P05387 115 aaKnown RBP19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 GKP32189 559 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 LSM11P83369 360 aaKnown RBP eCLIP19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 ZNF630Q2M218 657 aaPredicted RBP19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 ZNF791Q3KP31 576 aaPredicted RBP19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 HACD4Q5VWC8 232 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 ADNP2Q6IQ32 1131 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 SLC7A13Q8TCU3 470 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 APOBEC4Q8WW27 367 aaKnown RBP19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 WFDC6Q9BQY6 131 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 PRM3Q9NNZ6 103 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 KCNK7Q9Y2U2 307 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 MGAT4DA6NG13 374 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 ANKDD1BA6NHY2 528 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 GAPDHSO14556 408 aaPredicted RBP19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 SUSD5O60279 629 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 F11P03951 625 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 H1F0P07305 194 aaKnown RBP19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 JUPP14923 745 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 CTGFP29279 349 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 CALCRP30988 508 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 OR10A3P58181 314 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 SLC27A4Q6P1M0 643 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 NCEH1Q6PIU2 408 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 UBE2R2Q712K3 238 aaPredicted RBP19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 OXR1Q8N573 874 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 OR4F15Q8NGB8 312 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 ATG10Q9H0Y0 220 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 MGAT4CQ9UBM8 478 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 PLCL2Q9UPR0 1127 aa19.36■□□□□ 0.69
TMEFF1-201ENST00000374879 SERTM1A2A2V5 107 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 PEX14O75381 377 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 RAB13P51153 203 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 SNTB2Q13425 540 aaKnown RBP19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 MBTPS1Q14703 1052 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 TRIM40Q6P9F5 258 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 ZNF704Q6ZNC4 412 aaPredicted RBP19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 PRICKLE2Q7Z3G6 844 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 GPR156Q8NFN8 814 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 PTGFRNQ9P2B2 879 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 NDRG3Q9UGV2 375 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 ANGPT4Q9Y264 503 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 SLC6A5Q9Y345 797 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 PLXNA3P51805 1871 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 RP2O75695 350 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 H2AFB1P0C5Y9 115 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 GDI2P50395 445 aaKnown RBP19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 TAF10Q12962 218 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 PLD1Q13393 1074 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 HTR4Q13639 388 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 SFRP4Q6FHJ7 346 aaPredicted RBP19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 TMPRSS9Q7Z410 1059 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 CAMKMTQ7Z624 323 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 GPR32P1Q8NGA4 272 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 SPRYD4Q8WW59 207 aaPredicted RBP19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 PIGKQ92643 395 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 ACTR6Q9GZN1 396 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 NPDC1Q9NQX5 325 aaPredicted RBP19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 NOD1Q9Y239 953 aa19.35■□□□□ 0.69
TMEFF1-201ENST00000374879 GREB1Q4ZG55 1949 aa19.34■□□□□ 0.69
TMEFF1-201ENST00000374879 PQLC2LA1A4F0 135 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms