RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 IL20Q9NYY1 176 aa8.16□□□□□ -1.1
SNRNP40-202ENST00000373720 CCDC59Q9P031 241 aaKnown RBP8.16□□□□□ -1.1
SNRNP40-202ENST00000373720 ERVK-18Q9QC07 812 aa8.16□□□□□ -1.1
SNRNP40-202ENST00000373720 PRODH2Q9UF12 536 aa8.16□□□□□ -1.1
SNRNP40-202ENST00000373720 MRTO4Q9UKD2 239 aaKnown RBP8.16□□□□□ -1.1
SNRNP40-202ENST00000373720 DIMT1Q9UNQ2 313 aaKnown RBP8.16□□□□□ -1.1
SNRNP40-202ENST00000373720 PLCL2Q9UPR0 1127 aa8.16□□□□□ -1.1
SNRNP40-202ENST00000373720 PLEKHM1Q9Y4G2 1056 aa8.16□□□□□ -1.1
SNRNP40-202ENST00000373720 UGT2A1Q9Y4X1 527 aa8.16□□□□□ -1.1
SNRNP40-202ENST00000373720 PDE4DIPQ5VU43 2346 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 A0A1B0GTW7 788 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 TMEM129A0AVI4 362 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 FITM1A5D6W6 292 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 TRAPPC13A5PLN9 417 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 TLCD2A6NGC4 264 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 LMO7DNF2Z398 122 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 H3BN98 237 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 CCRL2O00421 344 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 CYR61O00622 381 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 PRODHO43272 600 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 B4GAT1O43505 415 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 B4GALT2O60909 372 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 TMEM127O75204 238 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 UBXN7O94888 489 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 INMTO95050 263 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 RCBTB2O95199 551 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 SNX4O95219 450 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 FADS2O95864 444 aaKnown RBP8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 RECKO95980 971 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 MT-ND2P03891 347 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 CHRM4P08173 479 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 STSP08842 583 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 INHBBP09529 407 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 CYP4B1P13584 511 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 CD36P16671 472 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 POLR2CP19387 275 aaPredicted RBP8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 CD53P19397 219 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 PSMA1P25786 263 aaKnown RBP8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 PSMB9P28065 219 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 HOXA6P31267 233 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 FMO3P31513 532 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 FEN1P39748 380 aaKnown RBP8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 MC3RP41968 323 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 CAPZBP47756 277 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 GSSP48637 474 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 PRKAG1P54619 331 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 RGS8P57771 180 aaPredicted RBP8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 DCAF7P61962 342 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 ZNF45Q02386 682 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 ACSM1Q08AH1 577 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 PPP1R8Q12972 351 aaKnown RBP8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 GPR50Q13585 617 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 GPR19Q15760 415 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 CLPPQ16740 277 aaPredicted RBP8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 PRTGQ2VWP7 1150 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 DEFB134Q4QY38 66 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 FHL5Q5TD97 284 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 C18orf63Q68DL7 685 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 DEF8Q6ZN54 512 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 SLC16A12Q6ZSM3 486 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 AHSA2Q719I0 299 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 ZNF550Q7Z398 422 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 SLC46A3Q7Z3Q1 461 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 SZRD1Q7Z422 152 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 GALNT10Q86SR1 603 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 PLD3Q8IV08 490 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 CCDC71Q8IV32 467 aaPredicted RBP8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 SPEM1Q8N4L4 309 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 C19orf47Q8N9M1 422 aaKnown RBP8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 KCT2Q8NC54 265 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 MORN4Q8NDC4 146 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 OR10Q1Q8NGQ4 319 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 HAVCR2Q8TDQ0 301 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 SLC37A2Q8TED4 501 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 ZHX1-C8orf76Q96EF9 292 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 RBM18Q96H35 190 aaKnown RBP8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 OR1F2PQ96R84 312 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 SDF2Q99470 211 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 DPYSL5Q9BPU6 564 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 LMF2Q9BU23 707 aaKnown RBP8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 TRIM2Q9C040 744 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 NDEL1Q9GZM8 345 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 SERHL2Q9H4I8 314 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 FGF20Q9NP95 211 aaPredicted RBP8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 INPP5EQ9NRR6 644 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 RASSF1Q9NS23 344 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 MAN2C1Q9NTJ4 1040 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 ZNF226Q9NYT6 803 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 DOLKQ9UPQ8 538 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 EXOSC1Q9Y3B2 195 aaKnown RBP8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 MMACHCQ9Y4U1 282 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 PEX16Q9Y5Y5 336 aa8.15□□□□□ -1.1
SNRNP40-202ENST00000373720 HEATR5BQ9P2D3 2071 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 A0A075B6Q4 140 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 IGHV1OR15-9A0A0B4J2B8 117 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 A0A0J9YVX5 310 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 TRBV4-1A0A0J9YWV2 114 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 A0A1W2PPW3 197 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 EME2A4GXA9 379 aaPredicted RBP8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 EFCAB9A8MZ26 197 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms