RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 C1orf109Q9NX04 203 aa17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 WBP11Q9Y2W2 641 aaKnown RBP17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 PTGDR2Q9Y5Y4 395 aa17.51■□□□□ 0.39
TRAPPC3-204ENST00000373166 EEF1E1-BLOC1S5C9J1V9 151 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 ARHGEF9O43307 516 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 EEF1E1O43324 174 aaKnown RBP17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 ERLIN1O75477 346 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 TRAPPC6AO75865 159 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 BPGMP07738 259 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 MYZAPP0CAP1 466 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 CD53P19397 219 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 S1PR1P21453 382 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 OPRM1P35372 400 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 MGAT2Q10469 447 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 TBCELQ5QJ74 424 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 SH2D4BQ5SQS7 431 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 DDIASQ8IXT1 998 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 CCDC116Q8IYX3 515 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 FAM9CQ8IZT9 166 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 PPP1R14CQ8TAE6 165 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 ZNF675Q8TD23 568 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 NUDT8Q8WV74 236 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 TWIST2Q8WVJ9 160 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 ZNF597Q96LX8 424 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 ZIM3Q96PE6 472 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 PRDM14Q9GZV8 571 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 PRODH2Q9UF12 536 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 ZNF639Q9UID6 485 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 CNOT11Q9UKZ1 510 aaKnown RBP17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 CCL27Q9Y4X3 112 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 DNAJC15Q9Y5T4 150 aa17.5■□□□□ 0.39
TRAPPC3-204ENST00000373166 ANKRD33BA6NCL7 494 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 CD8B2A6NJW9 211 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 NPIPB8E9PQR5 432 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 TP53I11O14683 189 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 LINC00032P0C843 101 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 PCSK2P16519 638 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 CTSSP25774 331 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 NTSP30990 170 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 ETV4P43268 484 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 MRPS35P82673 323 aaKnown RBP17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 RPS6KA2Q15349 733 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 NTRK2Q16620 822 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 ZNF628Q5EBL2 1059 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 FAM71E1Q6IPT2 247 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 KRTAP1-3Q8IUG1 177 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 OR52R1Q8NGF1 315 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 OR9A2Q8NGT5 310 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 AGR3Q8TD06 166 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 ADIPOR1Q96A54 375 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 CTHRC1Q96CG8 243 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 ERP27Q96DN0 273 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 BBS4Q96RK4 519 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 TRIB1Q96RU8 372 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 ITPAQ9BY32 194 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 CAMK2AQ9UQM7 478 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 TRAF6Q9Y4K3 522 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 NPFFR2Q9Y5X5 522 aa17.49■□□□□ 0.39
TRAPPC3-204ENST00000373166 TMEM233B4DJY2 109 aa17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 TM9SF1O15321 606 aa17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 TRIM3O75382 744 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 BCAS2O75934 225 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 LRATO95237 230 aa17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 CBX7O95931 251 aa17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 HRGP04196 525 aa17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 FGF4P08620 206 aa17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 MPIP34949 423 aa17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 SERPINB4P48594 390 aa17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 AGFG1P52594 562 aaKnown RBP17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 RPL38P63173 70 aaKnown RBP17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 RPP38P78345 283 aaKnown RBP17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 NNATQ16517 81 aa17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 TRMT12Q53H54 448 aaKnown RBP17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 VASNQ6EMK4 673 aa17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 LRIG3Q6UXM1 1119 aa17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 TMEM64Q6YI46 380 aa17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 EXOC3L1Q86VI1 746 aa17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 NUDCD3Q8IVD9 361 aa17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 OR2T11Q8NH01 316 aa17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 DIO2Q92813 273 aa17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 DACH2Q96NX9 599 aa17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 CCT7Q99832 543 aa17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 TUBB1Q9H4B7 451 aa17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 DTX4Q9Y2E6 619 aa17.48■□□□□ 0.39
TRAPPC3-204ENST00000373166 MBD3L4A6NDZ8 208 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC3-204ENST00000373166 MBD3L3A6NE82 208 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC3-204ENST00000373166 MBD3L5A6NJ08 208 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC3-204ENST00000373166 PIP5K1BO14986 540 aa17.47■□□□□ 0.39
TRAPPC3-204ENST00000373166 LY6G6DO95868 133 aa17.47■□□□□ 0.39
TRAPPC3-204ENST00000373166 IL18BPO95998 194 aa17.47■□□□□ 0.39
TRAPPC3-204ENST00000373166 CDK9P50750 372 aaKnown RBP17.47■□□□□ 0.39
TRAPPC3-204ENST00000373166 KIAA0040Q15053 153 aa17.47■□□□□ 0.39
TRAPPC3-204ENST00000373166 POU4F3Q15319 338 aa17.47■□□□□ 0.39
TRAPPC3-204ENST00000373166 MBD3L2Q8NHZ7 208 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC3-204ENST00000373166 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.47■□□□□ 0.394e-25■■■■■ 29
TRAPPC3-204ENST00000373166 KAT2AQ92830 837 aa17.47■□□□□ 0.39
TRAPPC3-204ENST00000373166 PGM2Q96G03 612 aa17.47■□□□□ 0.39
TRAPPC3-204ENST00000373166 LCORQ96JN0 433 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC3-204ENST00000373166 PKNOX2Q96KN3 472 aa17.47■□□□□ 0.39
TRAPPC3-204ENST00000373166 STMN4Q9H169 189 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms