RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 IMP3Q9NV31 184 aaKnown RBP12.88□□□□□ -0.35
USP49-201ENST00000373006 PTGFRNQ9P2B2 879 aa12.88□□□□□ -0.35
USP49-201ENST00000373006 ZNF624Q9P2J8 865 aaPredicted RBP12.88□□□□□ -0.35
USP49-201ENST00000373006 ICKQ9UPZ9 632 aa12.88□□□□□ -0.35
USP49-201ENST00000373006 HS3ST2Q9Y278 367 aa12.88□□□□□ -0.35
USP49-201ENST00000373006 A0A087WUU8 490 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 QSOX1O00391 747 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 ZNF155Q12901 538 aaPredicted RBP12.87□□□□□ -0.35
USP49-201ENST00000373006 GPNMBQ14956 572 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 FAM122CQ6P4D5 195 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 NPAS4Q8IUM7 802 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 TRAPPC5Q8IUR0 188 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 ZNF366Q8N895 744 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 ZNF485Q8NCK3 441 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 BEST4Q8NFU0 473 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 OR2A12Q8NGT7 310 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 ASB12Q8WXK4 309 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 TM4SF18Q96CE8 201 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 SECISBP2Q96T21 854 aaKnown RBP12.87□□□□□ -0.35
USP49-201ENST00000373006 ERVMER34-1Q9H9K5 563 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 ISG20L2Q9H9L3 353 aaKnown RBP12.87□□□□□ -0.35
USP49-201ENST00000373006 ZFP64Q9NPA5 681 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 RDH8Q9NYR8 311 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 EXOSC1Q9Y3B2 195 aaKnown RBP12.87□□□□□ -0.35
USP49-201ENST00000373006 KIAA1671Q9BY89 1806 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 FEZF1A0PJY2 475 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 POM121CA8CG34 1229 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 SLC2A10O95528 541 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 PRLHRP49683 370 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 ATP12AP54707 1039 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 MINDY4Q4G0A6 757 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 FAM27D1Q5T7N8 215 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 METTL3Q86U44 580 aaKnown RBP12.87□□□□□ -0.35
USP49-201ENST00000373006 SAMD12Q8N8I0 201 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 CEP76Q8TAP6 659 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 AP2M1Q96CW1 435 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 TBX5Q99593 518 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 ENAMQ9NRM1 1142 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 TDP1Q9NUW8 608 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 EIF3KQ9UBQ5 218 aaKnown RBP12.87□□□□□ -0.35
USP49-201ENST00000373006 ELF5Q9UKW6 265 aaPredicted RBP12.87□□□□□ -0.35
USP49-201ENST00000373006 SPATA2Q9UM82 520 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 GLOD5A6NK44 160 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 FAM183AA6NL82 134 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 SIGLEC5O15389 551 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 TBX6O95947 436 aaPredicted RBP12.87□□□□□ -0.35
USP49-201ENST00000373006 PLATP00750 562 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 SELPP16109 830 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 VIPR1P32241 457 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 SIGLEC14Q08ET2 396 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 EIF2B5Q13144 721 aaKnown RBP12.87□□□□□ -0.35
USP49-201ENST00000373006 IGSF11Q5DX21 431 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 BICRALQ6AI39 1079 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 TRAM1L1Q8N609 369 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 LSM14AQ8ND56 463 aaKnown RBP12.87□□□□□ -0.35
USP49-201ENST00000373006 PIGUQ9H490 435 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 ZNF304Q9HCX3 659 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 TEX10Q9NXF1 929 aaPredicted RBP12.87□□□□□ -0.35
USP49-201ENST00000373006 CPNE7Q9UBL6 633 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 SLC25A13Q9UJS0 675 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 CSNK1G3Q9Y6M4 447 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 ANAPC1Q9H1A4 1944 aa12.87□□□□□ -0.35
USP49-201ENST00000373006 EIF4EP06730 217 aaKnown RBP12.86□□□□□ -0.35
USP49-201ENST00000373006 NAGAP17050 411 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 PNLIPRP1P54315 467 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 GRIN2CQ14957 1233 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 NTRK2Q16620 822 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 PLA1AQ53H76 456 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 GARNL3Q5VVW2 1013 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 VASNQ6EMK4 673 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 TMEM25Q86YD3 366 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 GPR135Q8IZ08 494 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 OR9A1PQ8NGU1 263 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 ZFPM2Q8WW38 1151 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 RFT1Q96AA3 541 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 MS4A3Q96HJ5 214 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 GPR137Q96N19 417 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 SLC38A2Q96QD8 506 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 SGPP1Q9BX95 441 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 FOLH1BQ9HBA9 442 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 IL21Q9HBE4 155 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 A0A1W2PQ45 241 aaPredicted RBP12.86□□□□□ -0.35
USP49-201ENST00000373006 A0A1W2PQY0 241 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 FAM170BA6NMN3 283 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 PPM1DO15297 605 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 PQBP1O60828 265 aaKnown RBP12.86□□□□□ -0.35
USP49-201ENST00000373006 PRKRAO75569 313 aaKnown RBP12.86□□□□□ -0.35
USP49-201ENST00000373006 STATHP02808 62 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 ACP5P13686 325 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 GNSP15586 552 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 RECQLP46063 649 aaPredicted RBP12.86□□□□□ -0.35
USP49-201ENST00000373006 EPHB3P54753 998 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 ANGPT1Q15389 498 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 ENTPD8Q5MY95 495 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 TMEM65Q6PI78 240 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 GAREM2Q75VX8 874 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 KLHDC8AQ8IYD2 350 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 AMER3Q8N944 861 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 SLAIN1Q8ND83 568 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 CYB5D2Q8WUJ1 264 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms