RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 ZXDBP98169 803 aa10.84□□□□□ -0.67
PTPRF-203ENST00000372407 APOFQ13790 326 aa10.84□□□□□ -0.67
PTPRF-203ENST00000372407 CST6Q15828 149 aa10.84□□□□□ -0.67
PTPRF-203ENST00000372407 PIWIL3Q7Z3Z3 882 aaKnown RBP10.84□□□□□ -0.67
PTPRF-203ENST00000372407 CPOQ8IVL8 374 aa10.84□□□□□ -0.67
PTPRF-203ENST00000372407 CNTN4Q8IWV2 1026 aa10.84□□□□□ -0.67
PTPRF-203ENST00000372407 FAM217AQ8IXS0 508 aa10.84□□□□□ -0.67
PTPRF-203ENST00000372407 VWA5B2Q8N398 1253 aa10.84□□□□□ -0.67
PTPRF-203ENST00000372407 IQCF1Q8N6M8 205 aa10.84□□□□□ -0.67
PTPRF-203ENST00000372407 GALNT11Q8NCW6 608 aa10.84□□□□□ -0.67
PTPRF-203ENST00000372407 JPH3Q8WXH2 748 aaPredicted RBP10.84□□□□□ -0.67
PTPRF-203ENST00000372407 MSLNLQ96KJ4 702 aa10.84□□□□□ -0.67
PTPRF-203ENST00000372407 NEDD4LQ96PU5 975 aa10.84□□□□□ -0.67
PTPRF-203ENST00000372407 ZNF701Q9NV72 531 aaPredicted RBP10.84□□□□□ -0.67
PTPRF-203ENST00000372407 GCAP28676 217 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 ZNF84P51523 738 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 FGL1Q08830 312 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 NKAPLQ5M9Q1 402 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 SFRP4Q6FHJ7 346 aaPredicted RBP10.83□□□□□ -0.68
PTPRF-203ENST00000372407 FIGLAQ6QHK4 219 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 TMEM205Q6UW68 189 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 TTLL10Q6ZVT0 673 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 EGFL6Q8IUX8 553 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 CD300LFQ8TDQ1 290 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 DOK4Q8TEW6 326 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 SLC41A3Q96GZ6 507 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 C3orf30Q96M34 536 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 NECAB3Q96P71 396 aaPredicted RBP10.83□□□□□ -0.68
PTPRF-203ENST00000372407 PELI2Q9HAT8 420 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 HHATLQ9HCP6 504 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 C5AR2Q9P296 337 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 NUFIP1Q9UHK0 495 aaKnown RBP10.83□□□□□ -0.68
PTPRF-203ENST00000372407 DKKL1Q9UK85 242 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 LOC285095A0A1B0GVY8 99 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 MEGF11A6BM72 1044 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 M0R3H8 397 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 RNASET2O00584 256 aaKnown RBP10.83□□□□□ -0.68
PTPRF-203ENST00000372407 LYRM1O43325 122 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 NDUFB2O95178 105 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 ADRB3P13945 408 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 GM2AP17900 193 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 C5AR1P21730 350 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 GGT2P36268 569 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 SHFQ7M4L6 423 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 TCEAL8Q8IYN2 117 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 OR2T35Q8NGX2 323 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 BORCS8Q96FH0 119 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 WDR77Q9BQA1 342 aaPredicted RBP10.83□□□□□ -0.68
PTPRF-203ENST00000372407 PPIL3Q9H2H8 161 aaKnown RBP10.83□□□□□ -0.68
PTPRF-203ENST00000372407 NENFQ9UMX5 172 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 SLC7A11Q9UPY5 501 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 PHYHO14832 338 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 GNRHRP30968 328 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 RNF144AP50876 292 aaPredicted RBP10.83□□□□□ -0.68
PTPRF-203ENST00000372407 ARF3P61204 181 aaPredicted RBP10.83□□□□□ -0.68
PTPRF-203ENST00000372407 ARF1P84077 181 aaKnown RBP10.83□□□□□ -0.68
PTPRF-203ENST00000372407 EFR3AQ14156 821 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 GNMTQ14749 295 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 ZNF767PQ75MW2 155 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 SSX6Q7RTT6 188 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 GPR26Q8NDV2 337 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 TOR1AIP2Q8NFQ8 470 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 SAMD8Q96LT4 415 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 SLC17A9Q9BYT1 436 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 FANCFQ9NPI8 374 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 IL20RAQ9UHF4 553 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 ACTL7AQ9Y615 435 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 DRGXA6NNA5 263 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 ZNF16P17020 682 aaPredicted RBP10.83□□□□□ -0.68
PTPRF-203ENST00000372407 RUNX3Q13761 415 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 PGM2L1Q6PCE3 622 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 IGFN1Q86VF2 1251 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 CDRT4Q8N9R6 151 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 TMEM174Q8WUU8 243 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 TCEAL4Q96EI5 215 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 BMFQ96LC9 184 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.83□□□□□ -0.68
PTPRF-203ENST00000372407 PCDH10Q9P2E7 1040 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 KLHL9Q9P2J3 617 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 HIF3AQ9Y2N7 669 aa10.83□□□□□ -0.68
PTPRF-203ENST00000372407 COL5A3P25940 1745 aaPredicted RBP10.82□□□□□ -0.68
PTPRF-203ENST00000372407 NPIPA2E9PIF3 369 aa10.82□□□□□ -0.68
PTPRF-203ENST00000372407 NPIPA3F8WFD2 350 aa10.82□□□□□ -0.68
PTPRF-203ENST00000372407 M0R129 80 aa10.82□□□□□ -0.68
PTPRF-203ENST00000372407 POLR1CO15160 346 aaPredicted RBP10.82□□□□□ -0.68
PTPRF-203ENST00000372407 B4GAT1O43505 415 aa10.82□□□□□ -0.68
PTPRF-203ENST00000372407 DRD5P21918 477 aa10.82□□□□□ -0.68
PTPRF-203ENST00000372407 CST5P28325 142 aaPredicted RBP10.82□□□□□ -0.68
PTPRF-203ENST00000372407 GRPRP30550 384 aa10.82□□□□□ -0.68
PTPRF-203ENST00000372407 RGS19P49795 217 aa10.82□□□□□ -0.68
PTPRF-203ENST00000372407 MECP2P51608 486 aaKnown RBP10.82□□□□□ -0.68
PTPRF-203ENST00000372407 CTXN1P60606 82 aa10.82□□□□□ -0.68
PTPRF-203ENST00000372407 NKX3-2P78367 333 aa10.82□□□□□ -0.68
PTPRF-203ENST00000372407 SHC2P98077 582 aa10.82□□□□□ -0.68
PTPRF-203ENST00000372407 RIN1Q13671 783 aa10.82□□□□□ -0.68
PTPRF-203ENST00000372407 FRMPD2BQ6IN97 320 aa10.82□□□□□ -0.68
PTPRF-203ENST00000372407 MAMDC2Q7Z304 686 aaPredicted RBP10.82□□□□□ -0.68
PTPRF-203ENST00000372407 ZNF709Q8N972 641 aa10.82□□□□□ -0.68
PTPRF-203ENST00000372407 ADAMTS18Q8TE60 1221 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms