RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 METTL2AQ96IZ6 378 aaKnown RBP16.24■□□□□ 0.19
PTP4A1-201ENST00000370651 URM1Q9BTM9 101 aaKnown RBP16.24■□□□□ 0.19
PTP4A1-201ENST00000370651 MVB12BQ9H7P6 319 aa16.24■□□□□ 0.19
PTP4A1-201ENST00000370651 SLC22A5O76082 557 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 FPGSQ05932 587 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 NNATQ16517 81 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 ALG10Q5BKT4 473 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 ALG10BQ5I7T1 473 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 RTP2Q5QGT7 225 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 GSG1LQ6UXU4 331 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 OR4K17Q8NGC6 315 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 PXYLP1Q8TE99 480 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 CPPED1Q9BRF8 314 aaPredicted RBP16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 HRASLS2Q9NWW9 162 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 POU2F3Q9UKI9 436 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 ZNF283Q8N7M2 679 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 NAXEQ8NCW5 288 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 TOR1AIP2Q8NFQ8 470 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 OR5M3Q8NGP4 307 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 HMGB4Q8WW32 186 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 ACTRT3Q9BYD9 372 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 CD300AQ9UGN4 299 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 AK6Q9Y3D8 172 aaKnown RBP16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 GABARAPO95166 117 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 ADORA3P0DMS8 318 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 EIF2DP41214 584 aaKnown RBP16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 VSX2P58304 361 aaPredicted RBP16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 GK2Q14410 553 aaPredicted RBP16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 Q6ZPB1 254 aaPredicted RBP16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 TMPRSS9Q7Z410 1059 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 TTC9BQ8N6N2 239 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 DPH1Q9BZG8 443 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 ZNF701Q9NV72 531 aaPredicted RBP16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 GLS2Q9UI32 602 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 ADAMTS5Q9UNA0 930 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 IRS2Q9Y4H2 1338 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 NPIPB15A6NHN6 443 aaPredicted RBP16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 TTC34A8MYJ7 566 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 F5H5P2 479 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 PCGF3Q3KNV8 242 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 MTFR2Q6P444 385 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 CEP68Q76N32 757 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 CYB561A3Q8NBI2 242 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 DOK4Q8TEW6 326 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 OR2M4Q96R27 311 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 SLC5A7Q9GZV3 580 aa16.23■□□□□ 0.19
PTP4A1-201ENST00000370651 ARPC4-TTLL3A0A0A6YYG9 625 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 E2F3O00716 465 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 ARPC1BO15143 372 aaKnown RBP16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 HSPA12AO43301 675 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 CYP17A1P05093 508 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 PRKACAP17612 351 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 PTPN6P29350 595 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 PRSS3P35030 304 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 DAPP51397 102 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 RIDAP52758 137 aaKnown RBP16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 ZNF91Q05481 1191 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 WDR53Q7Z5U6 358 aaPredicted RBP16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 OR4N5Q8IXE1 308 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 AVL9Q8NBF6 648 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 OR51L1Q8NGJ5 315 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 OR2T4Q8NH00 348 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 SAP130Q9H0E3 1048 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 SYNPO2LQ9H987 977 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 PCDHB16Q9NRJ7 776 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 AKR1C4P17516 323 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 CD70P32970 193 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 PUS10Q3MIT2 529 aaKnown RBP16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 CHRDL2Q6WN34 429 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 SORCS1Q8WY21 1168 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 NT5C3BQ969T7 300 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 FAM46BQ96A09 425 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 DMRT3Q9NQL9 472 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 DDCP20711 480 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 LSSP48449 732 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 GNMTQ14749 295 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 NKAPLQ5M9Q1 402 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 FAM69AQ5T7M9 428 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 ARHGAP40Q5TG30 622 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 PTRH1Q86Y79 214 aaKnown RBP16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 PELI3Q8N2H9 469 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 C7orf50Q9BRJ6 194 aaKnown RBP16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 DRGXA6NNA5 263 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 F8W036 122 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 PPP1R3DO95685 299 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 JUNBP17275 347 aaPredicted RBP16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 AMY2BP19961 511 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 BLOC1S1P78537 153 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 TP53I3Q53FA7 332 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 GPR26Q8NDV2 337 aa16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 YARS2Q9Y2Z4 477 aaKnown RBP16.22■□□□□ 0.19
PTP4A1-201ENST00000370651 C4AP0C0L4 1744 aa16.21■□□□□ 0.19
PTP4A1-201ENST00000370651 C4BP0C0L5 1744 aa16.21■□□□□ 0.19
PTP4A1-201ENST00000370651 A0A1W2PPL8 197 aa16.21■□□□□ 0.19
PTP4A1-201ENST00000370651 CASC3O15234 703 aaKnown RBP16.21■□□□□ 0.19
PTP4A1-201ENST00000370651 CDC123O75794 336 aaPredicted RBP16.21■□□□□ 0.19
PTP4A1-201ENST00000370651 FGF18O76093 207 aa16.21■□□□□ 0.19
PTP4A1-201ENST00000370651 ERCC1P07992 297 aaPredicted RBP16.21■□□□□ 0.19
PTP4A1-201ENST00000370651 CD3GP09693 182 aa16.21■□□□□ 0.19
PTP4A1-201ENST00000370651 SIM1P81133 766 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms