RNA–Protein interactions for RNA: ENST00000370086.7

SSR4-203, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR4, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-203ENST00000370086 SDCCAG3Q96C92 435 aa13.21□□□□□ -0.29
SSR4-203ENST00000370086 TUBGCP3Q96CW5 907 aa13.21□□□□□ -0.29
SSR4-203ENST00000370086 TMCO6Q96DC7 493 aa13.21□□□□□ -0.29
SSR4-203ENST00000370086 MTERF3Q96E29 417 aa13.21□□□□□ -0.29
SSR4-203ENST00000370086 SORT1Q99523 831 aa13.21□□□□□ -0.29
SSR4-203ENST00000370086 LMF2Q9BU23 707 aaKnown RBP13.21□□□□□ -0.29
SSR4-203ENST00000370086 ATP6V1HQ9UI12 483 aa13.21□□□□□ -0.29
SSR4-203ENST00000370086 MAPRE3Q9UPY8 281 aa13.21□□□□□ -0.29
SSR4-203ENST00000370086 OR10H1Q9Y4A9 318 aa13.21□□□□□ -0.29
SSR4-203ENST00000370086 FAM215AQ9Y5M1 114 aa13.21□□□□□ -0.29
SSR4-203ENST00000370086 KIAA1549Q9HCM3 1950 aa13.21□□□□□ -0.29
SSR4-203ENST00000370086 NUP214P35658 2090 aaPredicted RBP13.2□□□□□ -0.3
SSR4-203ENST00000370086 B4DXG7 233 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 C19orf84I3L1E1 186 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 SCAMP2O15127 329 aaKnown RBP13.2□□□□□ -0.3
SSR4-203ENST00000370086 ABCB7O75027 752 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 ERLIN1O75477 346 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 CYP4B1P13584 511 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 ELAVL4P26378 380 aaKnown RBP13.2□□□□□ -0.3
SSR4-203ENST00000370086 MAPK1P28482 360 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 IL12BP29460 328 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 GPC1P35052 558 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 KRT20P35900 424 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 GAS1P54826 345 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 MANFP55145 182 aaKnown RBP13.2□□□□□ -0.3
SSR4-203ENST00000370086 PSPHP78330 225 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 EFR3AQ14156 821 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 TOMM20Q15388 145 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 PDCD2Q16342 344 aaPredicted RBP13.2□□□□□ -0.3
SSR4-203ENST00000370086 CYP27C1Q4G0S4 372 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 EIPR1Q53HC9 387 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 WIPI1Q5MNZ9 446 aaPredicted RBP13.2□□□□□ -0.3
SSR4-203ENST00000370086 R3HCC1LQ7Z5L2 792 aaKnown RBP13.2□□□□□ -0.3
SSR4-203ENST00000370086 ANKRD42Q8N9B4 389 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 ZFP28Q8NHY6 868 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 RND1Q92730 232 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 ZBED6CLQ96FA7 236 aaPredicted RBP13.2□□□□□ -0.3
SSR4-203ENST00000370086 PPP1R36Q96LQ0 422 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 PAIP2Q9BPZ3 127 aaKnown RBP13.2□□□□□ -0.3
SSR4-203ENST00000370086 TTYH2Q9BSA4 534 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 EQTNQ9NQ60 294 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 SERHLQ9NQF3 203 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 ACSS1Q9NUB1 689 aaPredicted RBP13.2□□□□□ -0.3
SSR4-203ENST00000370086 ALKBH4Q9NXW9 302 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 COQ3Q9NZJ6 369 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 FLRT3Q9NZU0 649 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 RNF6Q9Y252 685 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 SLC6A5Q9Y345 797 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 RAP2CQ9Y3L5 183 aa13.2□□□□□ -0.3
SSR4-203ENST00000370086 CENPEQ02224 2701 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 C15orf38-AP3S2A0A0A6YYH1 394 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 GXYLT2A0PJZ3 443 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 FIGNL2A6NMB9 653 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 C17orf51A8MQB3 221 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 WDR1O75083 606 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 GLI4P10075 376 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 LAMP1P11279 417 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 PRPS2P11908 318 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 GRK2P25098 689 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 HPCAL1P37235 193 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 MAP3K8P41279 467 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 PRKAG1P54619 331 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 WDR4P57081 412 aaKnown RBP13.19□□□□□ -0.3
SSR4-203ENST00000370086 CRYZQ08257 329 aaKnown RBP13.19□□□□□ -0.3
SSR4-203ENST00000370086 STX3Q13277 289 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 C1orf185Q5T7R7 199 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 YRDCQ86U90 279 aaKnown RBP13.19□□□□□ -0.3
SSR4-203ENST00000370086 CCDC71Q8IV32 467 aaPredicted RBP13.19□□□□□ -0.3
SSR4-203ENST00000370086 KRTCAP2Q8N6L1 136 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 FAM83FQ8NEG4 500 aaPredicted RBP13.19□□□□□ -0.3
SSR4-203ENST00000370086 NUP43Q8NFH3 380 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 HOXB13Q92826 284 aaPredicted RBP13.19□□□□□ -0.3
SSR4-203ENST00000370086 GIMAP5Q96F15 307 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 TIMP4Q99727 224 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 Q9N2J8 555 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 SIRT3Q9NTG7 399 aaPredicted RBP13.19□□□□□ -0.3
SSR4-203ENST00000370086 NTMQ9P121 344 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 HAO1Q9UJM8 370 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 CBLCQ9ULV8 474 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.19□□□□□ -0.3
SSR4-203ENST00000370086 WIF1Q9Y5W5 379 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 MED12Q93074 2177 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 NAV2Q8IVL1 2488 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 MAST4O15021 2626 aa13.19□□□□□ -0.3
SSR4-203ENST00000370086 TMEM120BA0PK00 339 aa13.18□□□□□ -0.3
SSR4-203ENST00000370086 FADS1O60427 444 aa13.18□□□□□ -0.3
SSR4-203ENST00000370086 CBR3O75828 277 aa13.18□□□□□ -0.3
SSR4-203ENST00000370086 IGKV1D-16P01601 117 aa13.18□□□□□ -0.3
SSR4-203ENST00000370086 G6PDP11413 515 aa13.18□□□□□ -0.3
SSR4-203ENST00000370086 GABRA3P34903 492 aa13.18□□□□□ -0.3
SSR4-203ENST00000370086 RPL3P39023 403 aaKnown RBP13.18□□□□□ -0.3
SSR4-203ENST00000370086 KIR3DL1P43629 444 aa13.18□□□□□ -0.3
SSR4-203ENST00000370086 RPL14P50914 215 aaKnown RBP13.18□□□□□ -0.3
SSR4-203ENST00000370086 EMX2Q04743 252 aa13.18□□□□□ -0.3
SSR4-203ENST00000370086 BST1Q10588 318 aa13.18□□□□□ -0.3
SSR4-203ENST00000370086 MLC1Q15049 377 aa13.18□□□□□ -0.3
SSR4-203ENST00000370086 ZNHIT3Q15649 155 aaPredicted RBP13.18□□□□□ -0.3
SSR4-203ENST00000370086 NHSL2Q5HYW2 709 aa13.18□□□□□ -0.3
SSR4-203ENST00000370086 DCST1Q5T197 706 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms