RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 PITPNBP48739 271 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 FAM205BPQ63HN1 556 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 ZNF695Q8IW36 515 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 SCLYQ96I15 445 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 DPH2Q9BQC3 489 aaPredicted RBP11.86□□□□□ -0.51
HCFC1-202ENST00000369984 CACNG6Q9BXT2 260 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 KCNK12Q9HB15 430 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 FAM86C1Q9NVL1 165 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 ABRACLQ9P1F3 81 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 CACNA1SQ13698 1873 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 PRAMEF11O60813 436 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 ATE1O95260 518 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 INHAP05111 366 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 MYF6P23409 242 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 TAS2R20P59543 309 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 PLCXD2Q0VAA5 305 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 ZNF805Q5CZA5 627 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 DBF4BQ8NFT6 615 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 OR13J1Q8NGT2 312 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 RHEBL1Q8TAI7 183 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 F5H5P2 479 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 KNG1P01042 644 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 PABPC4LP0CB38 370 aaKnown RBP11.86□□□□□ -0.51
HCFC1-202ENST00000369984 WDR45BQ5MNZ6 344 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 HES5Q5TA89 166 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 OR8K5Q8NH50 307 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 TWNKQ96RR1 684 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 PEBP4Q96S96 227 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 HHATLQ9HCP6 504 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 TLR9Q9NR96 1032 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 PLCXD1Q9NUJ7 323 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 NUP188Q5SRE5 1749 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 FAM221BA6H8Z2 402 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 DCNP07585 359 aaKnown RBP11.86□□□□□ -0.51
HCFC1-202ENST00000369984 GSCP56915 257 aaPredicted RBP11.86□□□□□ -0.51
HCFC1-202ENST00000369984 FGFBP1Q14512 234 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 GLYATL1Q969I3 302 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 LHPPQ9H008 270 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 CBY1Q9Y3M2 126 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 ZNF318Q5VUA4 2279 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 AGPAT2O15120 278 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 RETP07949 1114 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 ETV3P41162 512 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 PLBD1Q6P4A8 553 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 GRASPQ7Z6J2 395 aaPredicted RBP11.86□□□□□ -0.51
HCFC1-202ENST00000369984 TMEM185AQ8NFB2 350 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 C16orf78Q8WTQ4 265 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 TGIF2Q9GZN2 237 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 FBRSL1Q9HCM7 1045 aaKnown RBP11.86□□□□□ -0.51
HCFC1-202ENST00000369984 B3GNT2Q9NY97 397 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 DNAJC13O75165 2243 aa11.86□□□□□ -0.51
HCFC1-202ENST00000369984 DENRO43583 198 aaKnown RBP11.85□□□□□ -0.51
HCFC1-202ENST00000369984 PNPP00491 289 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 POU3F4P49335 361 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 RNASE10Q5GAN6 216 aaKnown RBP11.85□□□□□ -0.51
HCFC1-202ENST00000369984 METTL11BQ5VVY1 283 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 C6orf120Q7Z4R8 191 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 WDR53Q7Z5U6 358 aaPredicted RBP11.85□□□□□ -0.51
HCFC1-202ENST00000369984 SLC2A4RGQ9NR83 387 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 TEX10Q9NXF1 929 aaPredicted RBP11.85□□□□□ -0.51
HCFC1-202ENST00000369984 CNOT11Q9UKZ1 510 aaKnown RBP11.85□□□□□ -0.51
HCFC1-202ENST00000369984 SCAMP2O15127 329 aaKnown RBP11.85□□□□□ -0.51
HCFC1-202ENST00000369984 RPS15AP62244 130 aaKnown RBP11.85□□□□□ -0.51
HCFC1-202ENST00000369984 SHFQ7M4L6 423 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 CMTM1Q8IZ96 169 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 OR8J1Q8NGP2 316 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 NDNFQ8TB73 568 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 RIMBP3CA6NJZ7 1639 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 RIMBP3BA6NNM3 1639 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 RIMBP3Q9UFD9 1639 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 CRTAPO75718 401 aaPredicted RBP11.85□□□□□ -0.51
HCFC1-202ENST00000369984 HNF1BP35680 557 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 CREB3L2Q70SY1 520 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 MAL2Q969L2 176 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 FCRL3Q96P31 734 aaPredicted RBP11.85□□□□□ -0.51
HCFC1-202ENST00000369984 ZNF696Q9H7X3 374 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 PCDHGA5Q9Y5G8 931 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 ANKRD28O15084 1053 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 CDK1P06493 297 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 GSTM4Q03013 218 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 GRM2Q14416 872 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 TECRLQ5HYJ1 363 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 PRSS48Q7RTY5 328 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 ZNF439Q8NDP4 499 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 OR4Q3Q8NH05 313 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 SGTBQ96EQ0 304 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 TRIB3Q96RU7 358 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 HEMK1Q9Y5R4 338 aaPredicted RBP11.85□□□□□ -0.51
HCFC1-202ENST00000369984 ZNF541Q9H0D2 1346 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 TYROBPO43914 113 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 CHATP28329 748 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 CAV2P51636 162 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 CSNK2A1P68400 391 aaPredicted RBP11.85□□□□□ -0.51
HCFC1-202ENST00000369984 UGT3A2Q3SY77 523 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 CSNK2A3Q8NEV1 391 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 DAZLQ92904 295 aaKnown RBP11.85□□□□□ -0.51
HCFC1-202ENST00000369984 SEZ6LQ9BYH1 1024 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 SYNPO2LQ9H987 977 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 HSPE1-MOB4S4R3N1 261 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 NID2Q14112 1375 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms