RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 GATSQ8NAP1 163 aa15.08■□□□□ 0.01
COL17A1-202ENST00000369733 DPH1Q9BZG8 443 aa15.08■□□□□ 0.01
COL17A1-202ENST00000369733 SYNPO2LQ9H987 977 aa15.08■□□□□ 0.01
COL17A1-202ENST00000369733 TAS2R16Q9NYV7 291 aa15.08■□□□□ 0.01
COL17A1-202ENST00000369733 TRAPPC13A5PLN9 417 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 GPR39O43194 453 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 NUDT7P0C024 238 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 MSL3P1P0C860 447 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 PRKCAP17252 672 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 SMPDL3BQ92485 455 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 HIST1H2AAQ96QV6 131 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 ABCG4Q9H172 646 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 DMRT3Q9NQL9 472 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 GLS2Q9UI32 602 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 DRGXA6NNA5 263 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 SOD2P04179 222 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 IDUAP35475 653 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 ACTBP60709 375 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 ACTG1P63261 375 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 CBFBQ13951 182 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 TP53I3Q53FA7 332 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 NDUFAF5Q5TEU4 345 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 CEP68Q76N32 757 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 SERINC5Q86VE9 423 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 LRRC28Q86X40 367 aaPredicted RBP15.08■□□□□ 0
COL17A1-202ENST00000369733 SOX1O00570 391 aaPredicted RBP15.08■□□□□ 0
COL17A1-202ENST00000369733 OR7A17O14581 309 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 AKR1C4P17516 323 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 SLC29A4Q7RTT9 530 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 TTC9BQ8N6N2 239 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 CELF5Q8N6W0 485 aaKnown RBP15.08■□□□□ 0
COL17A1-202ENST00000369733 MSLNLQ96KJ4 702 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 HRASLS5Q96KN8 279 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 SMIM14Q96QK8 99 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 C7orf50Q9BRJ6 194 aaKnown RBP15.08■□□□□ 0
COL17A1-202ENST00000369733 SLCO3A1Q9UIG8 710 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 CLEC4EQ9ULY5 219 aa15.08■□□□□ 0
COL17A1-202ENST00000369733 NPIPB15A6NHN6 443 aaPredicted RBP15.07■□□□□ 0
COL17A1-202ENST00000369733 NCR1O76036 304 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 PPP1R3DO95685 299 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 LIPAP38571 399 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 AMZ1Q400G9 498 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 GSG1LQ6UXU4 331 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 Q6ZSR9 355 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 CBARPQ8N350 705 aaPredicted RBP15.07■□□□□ 0
COL17A1-202ENST00000369733 TMEM163Q8TC26 289 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 OR2M2Q96R28 347 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 ZNF559Q9BR84 538 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 DDX31Q9H8H2 851 aaKnown RBP15.07■□□□□ 0
COL17A1-202ENST00000369733 EPHA6Q9UF33 1036 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 SLC7A7Q9UM01 511 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 MYO5AQ9Y4I1 1855 aaKnown RBP15.07■□□□□ 0
COL17A1-202ENST00000369733 A6NL46 340 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 TNFRSF10BO14763 440 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 VEGFDO43915 354 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 ADH6P28332 368 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 LSSP48449 732 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 FIGNL1Q6PIW4 674 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 DOK4Q8TEW6 326 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 RIT1Q92963 219 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 NT5C3BQ969T7 300 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 SLCO4A1Q96BD0 722 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 CPNE2Q96FN4 548 aaPredicted RBP15.07■□□□□ 0
COL17A1-202ENST00000369733 DPH7Q9BTV6 452 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 G6PC3Q9BUM1 346 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 MTHFD2LQ9H903 347 aaPredicted RBP15.07■□□□□ 0
COL17A1-202ENST00000369733 TRAV18A0A075B6X5 111 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 CPNE6O95741 557 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 ACPPP15309 386 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 MLLT3P42568 568 aaPredicted RBP15.07■□□□□ 0
COL17A1-202ENST00000369733 RPL19P84098 196 aaKnown RBP15.07■□□□□ 0
COL17A1-202ENST00000369733 KRBOX4Q5JUW0 171 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 HACD4Q5VWC8 232 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 MTFR2Q6P444 385 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 RASGEF1AQ8N9B8 481 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 BEST4Q8NFU0 473 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 PDLIM5Q96HC4 596 aaKnown RBP15.07■□□□□ 0
COL17A1-202ENST00000369733 PINK1Q9BXM7 581 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 OR2A25A4D2G3 310 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 ZNF195O14628 629 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 ADRB3P13945 408 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 DDCP20711 480 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 LEXMQ3ZCV2 418 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 CHRFAM7AQ494W8 412 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 DEFB134Q4QY38 66 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 C2orf27AQ580R0 203 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 RNASE10Q5GAN6 216 aaKnown RBP15.07■□□□□ 0
COL17A1-202ENST00000369733 PODNL1Q6PEZ8 512 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 WDR53Q7Z5U6 358 aaPredicted RBP15.07■□□□□ 0
COL17A1-202ENST00000369733 PDZD3Q86UT5 571 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 RNF175Q8N4F7 328 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 NECAB3Q96P71 396 aaPredicted RBP15.07■□□□□ 0
COL17A1-202ENST00000369733 MFFQ9GZY8 342 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 SLC28A3Q9HAS3 691 aa15.07■□□□□ 0
COL17A1-202ENST00000369733 LATS1O95835 1130 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 INHAP05111 366 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 SCG5P05408 212 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 CLUP10909 449 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 ACP2P11117 423 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 PRRT3Q5FWE3 981 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms