RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 SLC22A15Q8IZD6 547 aa9.9□□□□□ -0.83
PRDM1-201ENST00000369089 DAW1Q8N136 415 aa9.9□□□□□ -0.83
PRDM1-201ENST00000369089 JAGN1Q8N5M9 183 aa9.9□□□□□ -0.83
PRDM1-201ENST00000369089 OR52P1PQ8NH57 321 aa9.9□□□□□ -0.83
PRDM1-201ENST00000369089 CASTOR1Q8WTX7 329 aa9.9□□□□□ -0.83
PRDM1-201ENST00000369089 NOL4LQ96MY1 436 aaPredicted RBP9.9□□□□□ -0.83
PRDM1-201ENST00000369089 DPEP2Q9H4A9 486 aa9.9□□□□□ -0.83
PRDM1-201ENST00000369089 NT5MQ9NPB1 228 aa9.9□□□□□ -0.83
PRDM1-201ENST00000369089 DCAF13Q9NV06 445 aaKnown RBP9.9□□□□□ -0.83
PRDM1-201ENST00000369089 IMP3Q9NV31 184 aaKnown RBP9.9□□□□□ -0.83
PRDM1-201ENST00000369089 PCDHB8Q9UN66 801 aa9.9□□□□□ -0.83
PRDM1-201ENST00000369089 COL1A1P02452 1464 aaPredicted RBP9.9□□□□□ -0.83
PRDM1-201ENST00000369089 SPEF2Q9C093 1822 aa9.9□□□□□ -0.83
PRDM1-201ENST00000369089 GXYLT2A0PJZ3 443 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 SLC11A2P49281 568 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 IRF8Q02556 426 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 TLE2Q04725 743 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 OR8G1Q15617 311 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 PABPC1L2AQ5JQF8 200 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 PAGE3Q5JUK9 113 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 SORCS1Q8WY21 1168 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 SYT11Q9BT88 431 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 ALG8Q9BVK2 526 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 ATG4BQ9Y4P1 393 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 PCDHA9Q9Y5H5 950 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 WNT9AO14904 365 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 RNF13O43567 381 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 AQP8O94778 261 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 PFKLP17858 780 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 KDELR2P33947 212 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 RAB1AP62820 205 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 CPSF6Q16630 551 aaKnown RBP eCLIP9.89□□□□□ -0.83
PRDM1-201ENST00000369089 ARHGAP11BQ3KRB8 267 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 ZNF585AQ6P3V2 769 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 SLC16A9Q7RTY1 509 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 PXKQ7Z7A4 578 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 C12orf40Q86WS4 652 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 MFSD6LQ8IWD5 586 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 SMPDL3AQ92484 453 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 TFB2MQ9H5Q4 396 aaKnown RBP9.89□□□□□ -0.83
PRDM1-201ENST00000369089 FN3KRPQ9HA64 309 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 SLC25A13Q9UJS0 675 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 MEIKINA0A087WXM9 373 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 C2orf92A0A1B0GVN3 265 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 OR2C1O95371 312 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 SOX14O95416 240 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 GLUD1P00367 558 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 RPN2P04844 631 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 F7P08709 466 aaPredicted RBP9.89□□□□□ -0.83
PRDM1-201ENST00000369089 RPL3P39023 403 aaKnown RBP9.89□□□□□ -0.83
PRDM1-201ENST00000369089 MASP1P48740 699 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 DGKEP52429 567 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 SRSF11Q05519 484 aaKnown RBP9.89□□□□□ -0.83
PRDM1-201ENST00000369089 HSF5Q4G112 596 aaPredicted RBP9.89□□□□□ -0.83
PRDM1-201ENST00000369089 BEX5Q5H9J7 111 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 ESRP1Q6NXG1 681 aaKnown RBP9.89□□□□□ -0.83
PRDM1-201ENST00000369089 ABHD15Q6UXT9 468 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 RANBP3LQ86VV4 465 aaPredicted RBP9.89□□□□□ -0.83
PRDM1-201ENST00000369089 PPP1R3BQ86XI6 285 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 OR5B17Q8NGF7 314 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 RXFP4Q8TDU9 374 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 MS4A3Q96HJ5 214 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 WDFY2Q96P53 400 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 NDC1Q9BTX1 674 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 TRIM2Q9C040 744 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 ISYNA1Q9NPH2 558 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 TNFSF13BQ9Y275 285 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 RNF212BA8MTL3 300 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 SLC10A3P09131 477 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 ZNF888P0CJ79 500 aaPredicted RBP9.89□□□□□ -0.83
PRDM1-201ENST00000369089 AKR1A1P14550 325 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 GNSP15586 552 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 S100GP29377 79 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 MPIP34949 423 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 TTPAP49638 278 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 PSEN2P49810 448 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 SLC25A11Q02978 314 aaKnown RBP9.89□□□□□ -0.83
PRDM1-201ENST00000369089 VAMP3Q15836 100 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 SPANXN4Q5MJ08 99 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 C6orf136Q5SQH8 315 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 PLPPR4Q7Z2D5 763 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 HORMAD2Q8N7B1 307 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 ZFP41Q8N8Y5 198 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 DCUN1D4Q92564 292 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 KCTD12Q96CX2 325 aaKnown RBP9.89□□□□□ -0.83
PRDM1-201ENST00000369089 OR5M11Q96RB7 305 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 C20orf85Q9H1P6 137 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 TIMM13Q9Y5L4 95 aaPredicted RBP9.89□□□□□ -0.83
PRDM1-201ENST00000369089 ROBO1Q9Y6N7 1651 aa9.89□□□□□ -0.83
PRDM1-201ENST00000369089 NPEPPSL1A6NEC2 478 aa9.88□□□□□ -0.83
PRDM1-201ENST00000369089 TMEM200CA6NKL6 621 aa9.88□□□□□ -0.83
PRDM1-201ENST00000369089 I6L893 689 aaPredicted RBP9.88□□□□□ -0.83
PRDM1-201ENST00000369089 M0R2N6 131 aa9.88□□□□□ -0.83
PRDM1-201ENST00000369089 TRBC1P01850 177 aa9.88□□□□□ -0.83
PRDM1-201ENST00000369089 RPLP2P05387 115 aaKnown RBP9.88□□□□□ -0.83
PRDM1-201ENST00000369089 FABP4P15090 132 aa9.88□□□□□ -0.83
PRDM1-201ENST00000369089 MGMTP16455 207 aa9.88□□□□□ -0.83
PRDM1-201ENST00000369089 ATP5A1P25705 553 aaKnown RBP9.88□□□□□ -0.83
PRDM1-201ENST00000369089 HOXC13P31276 330 aa9.88□□□□□ -0.83
PRDM1-201ENST00000369089 CD86P42081 329 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms