RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 PYURFQ96I23 114 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 RSRC1Q96IZ7 334 aaKnown RBP8.19□□□□□ -1.1
SNX27-201ENST00000368838 LRFN5Q96NI6 719 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 BTBD9Q96Q07 612 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 BBS4Q96RK4 519 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 BTBD2Q9BX70 525 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 EVA1AQ9H8M9 152 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 IL1RAPQ9NPH3 570 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 FAF1Q9UNN5 650 aaPredicted RBP8.19□□□□□ -1.1
SNX27-201ENST00000368838 FARSAQ9Y285 508 aaKnown RBP8.19□□□□□ -1.1
SNX27-201ENST00000368838 MRPS2Q9Y399 296 aaKnown RBP8.19□□□□□ -1.1
SNX27-201ENST00000368838 NAALAD2Q9Y3Q0 740 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 PCDHGA6Q9Y5G7 932 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 CLDN16Q9Y5I7 305 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 RNF103-CHMP3A0A140T963 221 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 CLEC18AA5D8T8 446 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 C21orf140B9A014 251 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 TMEM150CB9EJG8 249 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 MASP2O00187 686 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 PCDH17O14917 1159 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 DSCR3O14972 297 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 CHST10O43529 356 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 DEAF1O75398 565 aaPredicted RBP8.18□□□□□ -1.1
SNX27-201ENST00000368838 OR2B3O76000 313 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 B3GALT4O96024 378 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 AK1P00568 194 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 RNF224P0DH78 156 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 MSX2P35548 267 aaPredicted RBP8.18□□□□□ -1.1
SNX27-201ENST00000368838 HSPA13P48723 471 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 ALDH9A1P49189 494 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 PGDP52209 483 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 NCBP2P52298 156 aaKnown RBP eCLIP8.18□□□□□ -1.1
SNX27-201ENST00000368838 FOXL2P58012 376 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 DSTNP60981 165 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 SELENOWP63302 87 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 CDK6Q00534 326 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 IQCCQ4KMZ1 466 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 ZNF628Q5EBL2 1059 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 GCNT6Q5T4J0 391 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 FHL5Q5TD97 284 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 REEP3Q6NUK4 255 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 PPP4R4Q6NUP7 873 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 CLEC18BQ6UXF7 455 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 QSOX2Q6ZRP7 698 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 IFNEQ86WN2 208 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 TMEM151BQ8IW70 566 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 GPR135Q8IZ08 494 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 LILRA2Q8N149 483 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 FAM26EQ8N5C1 309 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 MEIOBQ8N635 442 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 CLEC18CQ8NCF0 446 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 OR1L3Q8NH93 324 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 CDC26Q8NHZ8 85 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 CPT1CQ8TCG5 803 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 NRG4Q8WWG1 115 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 EXOSC8Q96B26 276 aaKnown RBP8.18□□□□□ -1.1
SNX27-201ENST00000368838 ANKRD9Q96BM1 317 aaPredicted RBP8.18□□□□□ -1.1
SNX27-201ENST00000368838 GIMAP5Q96F15 307 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 RDH12Q96NR8 316 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 STACQ99469 402 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 MACROD1Q9BQ69 325 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 BDH2Q9BUT1 245 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 ING2Q9H160 280 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 FANCEQ9HB96 536 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 POLE3Q9NRF9 147 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 DUSP22Q9NRW4 184 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 CUTCQ9NTM9 273 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 CALML5Q9NZT1 146 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 DNAJB9Q9UBS3 223 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 FBXW2Q9UKT8 454 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 PADI2Q9Y2J8 665 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 DSPPQ9NZW4 1301 aa8.18□□□□□ -1.1
SNX27-201ENST00000368838 NUP214P35658 2090 aaPredicted RBP8.17□□□□□ -1.1
SNX27-201ENST00000368838 IGKV3D-11A0A0A0MRZ8 115 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 A0A0G2JPF8 293 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 A0A1B0GX78 115 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 A8MVJ9 347 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 HNRNPCL2B2RXH8 293 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 HNRNPCL3B7ZW38 293 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 H0Y3Z8 333 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 HMGN4O00479 90 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 EREGO14944 169 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 GSTA4O15217 222 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 B4GALT2O60909 372 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 GCM2O75603 506 aaPredicted RBP8.17□□□□□ -1.1
SNX27-201ENST00000368838 AGFG2O95081 481 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 ALBP02768 609 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 EIF2S1P05198 315 aaKnown RBP8.17□□□□□ -1.1
SNX27-201ENST00000368838 CTSBP07858 339 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 HNRNPCL4P0DMR1 293 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 GP1BBP13224 206 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 ZNF26P17031 533 aaPredicted RBP8.17□□□□□ -1.1
SNX27-201ENST00000368838 OTX2P32243 289 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 SOX18P35713 384 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 CHI3L1P36222 383 aaPredicted RBP8.17□□□□□ -1.1
SNX27-201ENST00000368838 PRIM2P49643 509 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 KHKP50053 298 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 CDK9P50750 372 aaKnown RBP8.17□□□□□ -1.1
SNX27-201ENST00000368838 RNF144AP50876 292 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms