RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 ATXN7L2Q5T6C5 722 aaPredicted RBP16.89■□□□□ 0.29
CHTOP-201ENST00000368686 Q6ZTK2 550 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 SCN4BQ8IWT1 228 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 POGLUT1Q8NBL1 392 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 DNAJB3Q8WWF6 145 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 PAWRQ96IZ0 340 aaKnown RBP16.89■□□□□ 0.29
CHTOP-201ENST00000368686 SLC12A9Q9BXP2 914 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 MED11Q9P086 117 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 PLXNA3P51805 1871 aa16.88■□□□□ 0.29
CHTOP-201ENST00000368686 PIKFYVEQ9Y2I7 2098 aa16.88■□□□□ 0.29
CHTOP-201ENST00000368686 LRRN3E7EW58 273 aa16.88■□□□□ 0.29
CHTOP-201ENST00000368686 KDELR3O43731 214 aa16.88■□□□□ 0.29
CHTOP-201ENST00000368686 HPP00738 406 aa16.88■□□□□ 0.29
CHTOP-201ENST00000368686 MMP3P08254 477 aa16.88■□□□□ 0.29
CHTOP-201ENST00000368686 CPN1P15169 458 aa16.88■□□□□ 0.29
CHTOP-201ENST00000368686 RORAP35398 523 aa16.88■□□□□ 0.29
CHTOP-201ENST00000368686 DGCR2P98153 550 aa16.88■□□□□ 0.29
CHTOP-201ENST00000368686 KLF9Q13886 244 aaPredicted RBP16.88■□□□□ 0.29
CHTOP-201ENST00000368686 UPP1Q16831 310 aa16.88■□□□□ 0.29
CHTOP-201ENST00000368686 SLC5A12Q1EHB4 618 aa16.88■□□□□ 0.29
CHTOP-201ENST00000368686 SFXN4Q6P4A7 337 aa16.88■□□□□ 0.29
CHTOP-201ENST00000368686 TMUB2Q71RG4 321 aa16.88■□□□□ 0.29
CHTOP-201ENST00000368686 THEM5Q8N1Q8 247 aa16.88■□□□□ 0.29
CHTOP-201ENST00000368686 C7orf57Q8NEG2 295 aa16.88■□□□□ 0.29
CHTOP-201ENST00000368686 TRMT10AQ8TBZ6 339 aaKnown RBP16.88■□□□□ 0.29
CHTOP-201ENST00000368686 EID2BQ96D98 161 aa16.88■□□□□ 0.29
CHTOP-201ENST00000368686 LRRN3Q9H3W5 708 aa16.88■□□□□ 0.29
CHTOP-201ENST00000368686 BRF2Q9HAW0 419 aa16.88■□□□□ 0.29
CHTOP-201ENST00000368686 ZNF106Q9H2Y7 1883 aaKnown RBP16.88■□□□□ 0.29
CHTOP-201ENST00000368686 TRABD2BA6NFA1 517 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 KDM4EB2RXH2 506 aaPredicted RBP16.87■□□□□ 0.29
CHTOP-201ENST00000368686 CACNB4O00305 520 aaPredicted RBP16.87■□□□□ 0.29
CHTOP-201ENST00000368686 GAPDHSO14556 408 aaPredicted RBP16.87■□□□□ 0.29
CHTOP-201ENST00000368686 SEMA7AO75326 666 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 IFNA4P05014 189 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 URODP06132 367 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 S100A6P06703 90 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 C8GP07360 202 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 CD96P40200 585 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 SEC61A1P61619 476 aaKnown RBP16.87■□□□□ 0.29
CHTOP-201ENST00000368686 MC2RQ01718 297 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 CRHR2Q13324 411 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 MICALL2Q8IY33 904 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 SLC7A13Q8TCU3 470 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 TREX2Q9BQ50 279 aaPredicted RBP16.87■□□□□ 0.29
CHTOP-201ENST00000368686 PAAF1Q9BRP4 392 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 NKIRAS2Q9NYR9 191 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 ACAD8Q9UKU7 415 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 PAPPA2Q9BXP8 1791 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 GNG14A0A1W2PPG7 69 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 MBLAC1A4D2B0 266 aaPredicted RBP16.87■□□□□ 0.29
CHTOP-201ENST00000368686 HMSDA8MTL9 139 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 MID1O15344 667 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 WNT1P04628 370 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 ANKRD34CP0C6C1 535 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 TACR2P21452 398 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 ADCYAP1R1P41586 468 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 UBXN2BQ14CS0 331 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 RNASE12Q5GAN4 147 aaKnown RBP16.87■□□□□ 0.29
CHTOP-201ENST00000368686 FAM69AQ5T7M9 428 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 SLC30A6Q6NXT4 461 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 GSG1LQ6UXU4 331 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 APOBEC3FQ8IUX4 373 aaKnown RBP16.87■□□□□ 0.29
CHTOP-201ENST00000368686 LINC00471Q8N535 108 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 SPRYD4Q8WW59 207 aaPredicted RBP16.87■□□□□ 0.29
CHTOP-201ENST00000368686 FBXO44Q9H4M3 255 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 REEP4Q9H6H4 257 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 TEX10Q9NXF1 929 aaPredicted RBP16.87■□□□□ 0.29
CHTOP-201ENST00000368686 CFAP97Q9P2B7 532 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 KLHL42Q9P2K6 505 aa16.87■□□□□ 0.29
CHTOP-201ENST00000368686 TRBV5-4A0A0C4DH59 114 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 F5H5T6 163 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 RNF13O43567 381 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 EPHX1P07099 455 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 TIA1P31483 386 aaKnown RBP eCLIP16.86■□□□□ 0.293e-7■■□□□ 13.8
CHTOP-201ENST00000368686 BDH1Q02338 343 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 TSPAN33Q86UF1 283 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 TMEM17Q86X19 198 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 OR1M1Q8NGA1 313 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 GPR32P1Q8NGA4 272 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 OR5AK3PQ8NH89 298 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 KAT2AQ92830 837 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 INTS12Q96CB8 462 aaKnown RBP16.86■□□□□ 0.29
CHTOP-201ENST00000368686 PITHD1Q9GZP4 211 aaPredicted RBP16.86■□□□□ 0.29
CHTOP-201ENST00000368686 GAREM1Q9H706 876 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 TXNRD2Q9NNW7 524 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 EQTNQ9NQ60 294 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 NANSQ9NR45 359 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 EPHA6Q9UF33 1036 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 CRLS1Q9UJA2 301 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 OR2M5A3KFT3 312 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 GSTZ1O43708 216 aaPredicted RBP16.86■□□□□ 0.29
CHTOP-201ENST00000368686 GPR37L1O60883 481 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 AQP8O94778 261 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 OR2A4O95047 310 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 SMIM10L2AP0DMW4 78 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 SMIM10L2BP0DMW5 78 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 CD22P20273 847 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 MMP11P24347 488 aa16.86■□□□□ 0.29
CHTOP-201ENST00000368686 GPR15P49685 360 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms