RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 VEZF1Q14119 521 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 PUS10Q3MIT2 529 aaKnown RBP10.01□□□□□ -0.81
TPM3-212ENST00000368533 SPDYE7PQ495Y7 208 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 ZMAT1Q5H9K5 638 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 GCNT6Q5T4J0 391 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 FCRL6Q6DN72 434 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 ZNF605Q86T29 641 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 NOXA1Q86UR1 476 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 CCDC71Q8IV32 467 aaPredicted RBP10.01□□□□□ -0.81
TPM3-212ENST00000368533 ENTHD1Q8IYW4 607 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 LGI4Q8N135 537 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 GJD3Q8N144 294 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 TRIM63Q969Q1 353 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 TGM7Q96PF1 710 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 MAPKAP1Q9BPZ7 522 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 CXorf36Q9H7Y0 433 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 TMEM184CQ9NVA4 438 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 GPATCH2Q9NW75 528 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 AHSPQ9NZD4 102 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 ZNF282Q9UDV7 671 aaPredicted RBP10.01□□□□□ -0.81
TPM3-212ENST00000368533 RNF6Q9Y252 685 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 CEP192Q8TEP8 1941 aa10.01□□□□□ -0.81
TPM3-212ENST00000368533 ASCC3Q8N3C0 2202 aaKnown RBP10□□□□□ -0.81
TPM3-212ENST00000368533 TRBC2A0A5B9 178 aa10□□□□□ -0.81
TPM3-212ENST00000368533 J3KTA2 159 aa10□□□□□ -0.81
TPM3-212ENST00000368533 K7ESF4 209 aa10□□□□□ -0.81
TPM3-212ENST00000368533 DNAJB5O75953 348 aa10□□□□□ -0.81
TPM3-212ENST00000368533 IGLV3-19P01714 112 aa10□□□□□ -0.81
TPM3-212ENST00000368533 PSKH1P11801 424 aa10□□□□□ -0.81
TPM3-212ENST00000368533 GRK5P34947 590 aa10□□□□□ -0.81
TPM3-212ENST00000368533 LIPAP38571 399 aa10□□□□□ -0.81
TPM3-212ENST00000368533 RNF144AP50876 292 aaPredicted RBP10□□□□□ -0.81
TPM3-212ENST00000368533 KCNAB1Q14722 419 aa10□□□□□ -0.81
TPM3-212ENST00000368533 PROX2Q3B8N5 592 aa10□□□□□ -0.81
TPM3-212ENST00000368533 IFI44LQ53G44 452 aa10□□□□□ -0.81
TPM3-212ENST00000368533 RPS26P11Q5JNZ5 115 aaPredicted RBP10□□□□□ -0.81
TPM3-212ENST00000368533 TOR2AQ5JU69 321 aa10□□□□□ -0.81
TPM3-212ENST00000368533 ZNF517Q6ZMY9 492 aaPredicted RBP10□□□□□ -0.81
TPM3-212ENST00000368533 ARL14Q8N4G2 192 aa10□□□□□ -0.81
TPM3-212ENST00000368533 TOR1AIP2Q8NFQ8 470 aa10□□□□□ -0.81
TPM3-212ENST00000368533 OR4M1Q8NGD0 313 aa10□□□□□ -0.81
TPM3-212ENST00000368533 OR9Q2Q8NGE9 314 aa10□□□□□ -0.81
TPM3-212ENST00000368533 OR5D16Q8NGK9 328 aa10□□□□□ -0.81
TPM3-212ENST00000368533 PUM2Q8TB72 1066 aaKnown RBP eCLIP10□□□□□ -0.812e-8■■■■□ 26.5
TPM3-212ENST00000368533 DACT3Q96B18 629 aaPredicted RBP10□□□□□ -0.81
TPM3-212ENST00000368533 C7orf34Q96L11 122 aa10□□□□□ -0.81
TPM3-212ENST00000368533 SMOC1Q9H4F8 434 aa10□□□□□ -0.81
TPM3-212ENST00000368533 SYNDIG1Q9H7V2 258 aa10□□□□□ -0.81
TPM3-212ENST00000368533 HCN4Q9Y3Q4 1203 aa10□□□□□ -0.81
TPM3-212ENST00000368533 EML5Q05BV3 1969 aa10□□□□□ -0.81
TPM3-212ENST00000368533 LRP4O75096 1905 aa10□□□□□ -0.81
TPM3-212ENST00000368533 ASPMQ8IZT6 3477 aa10□□□□□ -0.81
TPM3-212ENST00000368533 A0A1W2PR48 441 aa10□□□□□ -0.81
TPM3-212ENST00000368533 CIB4A0PJX0 185 aa10□□□□□ -0.81
TPM3-212ENST00000368533 SLC9B1P1A6NJY1 282 aa10□□□□□ -0.81
TPM3-212ENST00000368533 DSCR3O14972 297 aa10□□□□□ -0.81
TPM3-212ENST00000368533 ADAMDEC1O15204 470 aa10□□□□□ -0.81
TPM3-212ENST00000368533 AIREO43918 545 aa10□□□□□ -0.81
TPM3-212ENST00000368533 WBP4O75554 376 aaKnown RBP10□□□□□ -0.81
TPM3-212ENST00000368533 HOXC4P09017 264 aaPredicted RBP10□□□□□ -0.81
TPM3-212ENST00000368533 ZNF250P15622 560 aa10□□□□□ -0.81
TPM3-212ENST00000368533 CTRB1P17538 263 aa10□□□□□ -0.81
TPM3-212ENST00000368533 SELENOWP63302 87 aa10□□□□□ -0.81
TPM3-212ENST00000368533 TEAD4Q15561 434 aa10□□□□□ -0.81
TPM3-212ENST00000368533 EXOC3L2Q2M3D2 409 aa10□□□□□ -0.81
TPM3-212ENST00000368533 PRPF38BQ5VTL8 546 aaKnown RBP10□□□□□ -0.81
TPM3-212ENST00000368533 CTRB2Q6GPI1 263 aa10□□□□□ -0.81
TPM3-212ENST00000368533 TRIM40Q6P9F5 258 aa10□□□□□ -0.81
TPM3-212ENST00000368533 PRSS48Q7RTY5 328 aa10□□□□□ -0.81
TPM3-212ENST00000368533 FLVCR1-AS1Q8TAF5 88 aa10□□□□□ -0.81
TPM3-212ENST00000368533 ZNF566Q969W8 418 aa10□□□□□ -0.81
TPM3-212ENST00000368533 RNF170Q96K19 258 aa10□□□□□ -0.81
TPM3-212ENST00000368533 SPACA7Q96KW9 195 aa10□□□□□ -0.81
TPM3-212ENST00000368533 SLC38A3Q99624 504 aa10□□□□□ -0.81
TPM3-212ENST00000368533 MAP3K3Q99759 626 aa10□□□□□ -0.81
TPM3-212ENST00000368533 GABARAPL1Q9H0R8 117 aa10□□□□□ -0.81
TPM3-212ENST00000368533 GPR83Q9NYM4 423 aa10□□□□□ -0.81
TPM3-212ENST00000368533 NDUFAF4Q9P032 175 aa10□□□□□ -0.81
TPM3-212ENST00000368533 BTNL2Q9UIR0 455 aa10□□□□□ -0.81
TPM3-212ENST00000368533 A0A1W2PR77 199 aa10□□□□□ -0.81
TPM3-212ENST00000368533 METTL15A6NJ78 407 aa10□□□□□ -0.81
TPM3-212ENST00000368533 SAGE2PA6NJ88 616 aa10□□□□□ -0.81
TPM3-212ENST00000368533 FAM227AF5H4B4 570 aa10□□□□□ -0.81
TPM3-212ENST00000368533 H0YGG7 62 aa10□□□□□ -0.81
TPM3-212ENST00000368533 GADD45AP24522 165 aa10□□□□□ -0.81
TPM3-212ENST00000368533 S100A5P33763 92 aa10□□□□□ -0.81
TPM3-212ENST00000368533 CTSKP43235 329 aa10□□□□□ -0.81
TPM3-212ENST00000368533 ARF3P61204 181 aaPredicted RBP10□□□□□ -0.81
TPM3-212ENST00000368533 CDK6Q00534 326 aa10□□□□□ -0.81
TPM3-212ENST00000368533 MVKQ03426 396 aa10□□□□□ -0.81
TPM3-212ENST00000368533 PCDH1Q08174 1060 aa10□□□□□ -0.81
TPM3-212ENST00000368533 LTB4RQ15722 352 aa10□□□□□ -0.81
TPM3-212ENST00000368533 TIGD6Q17RP2 521 aa10□□□□□ -0.81
TPM3-212ENST00000368533 PRAMEF17Q5VTA0 474 aa10□□□□□ -0.81
TPM3-212ENST00000368533 ARMC6Q6NXE6 501 aa10□□□□□ -0.81
TPM3-212ENST00000368533 PAQR7Q86WK9 346 aa10□□□□□ -0.81
TPM3-212ENST00000368533 KAT2AQ92830 837 aa10□□□□□ -0.81
TPM3-212ENST00000368533 CDADC1Q9BWV3 514 aa10□□□□□ -0.81
TPM3-212ENST00000368533 MYNNQ9NPC7 610 aa10□□□□□ -0.81
TPM3-212ENST00000368533 ACOXLQ9NUZ1 547 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms