RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 RTL4Q6ZR62 310 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 MDGA2Q7Z553 956 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 ZNF227Q86WZ6 799 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 MSRB3Q8IXL7 192 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 DPP10Q8N608 796 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 BCORP1Q8N888 145 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 TEX19Q8NA77 164 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 OR10G3Q8NGC4 313 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 HOXB13Q92826 284 aaPredicted RBP12.8□□□□□ -0.36
TPM3-211ENST00000368531 TMEM125Q96AQ2 219 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 ADOQ96SZ5 270 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 STACQ99469 402 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 SLC39A3Q9BRY0 314 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 RNF32Q9H0A6 362 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 PIGUQ9H490 435 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 ARL8BQ9NVJ2 186 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 BBIP1A8MTZ0 92 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 ATXN7O15265 892 aaPredicted RBP12.79□□□□□ -0.36
TPM3-211ENST00000368531 UGT2B11O75310 529 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 SLC25A12O75746 678 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 NEURL1O76050 574 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 KCNK2O95069 426 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 IGKV1D-16P01601 117 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 ETFAP13804 333 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 CD46P15529 392 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 HOXB9P17482 250 aaPredicted RBP12.79□□□□□ -0.36
TPM3-211ENST00000368531 PIGAP37287 484 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 MAN2A2P49641 1150 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 TMED10P49755 219 aaKnown RBP12.79□□□□□ -0.36
TPM3-211ENST00000368531 GPR85P60893 370 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 NFATC3Q12968 1075 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 PLEKHN1Q494U1 663 aaPredicted RBP12.79□□□□□ -0.36
TPM3-211ENST00000368531 ZNF766Q5HY98 468 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 EXOSC6Q5RKV6 272 aaKnown RBP12.79□□□□□ -0.36
TPM3-211ENST00000368531 PRAMEF20Q5VT98 475 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 OLIG3Q7RTU3 272 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 C16orf62Q7Z3J2 963 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 GPALPP1Q8IXQ4 340 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 FITM2Q8N6M3 262 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 PCYOX1LQ8NBM8 494 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 MDS2Q8NDY4 140 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 CMTM5Q96DZ9 223 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 WBP1Q96G27 269 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 C5orf34Q96MH7 638 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 COL21A1Q96P44 957 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 CGREF1Q99674 301 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 BTBD2Q9BX70 525 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 DUSP22Q9NRW4 184 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 FBXO34Q9NWN3 711 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 RALYQ9UKM9 306 aaKnown RBP12.79□□□□□ -0.36
TPM3-211ENST00000368531 NINQ8N4C6 2090 aa12.79□□□□□ -0.36
TPM3-211ENST00000368531 USP24Q9UPU5 2620 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 TRBV5-3A0A0A0MS03 114 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 TRAV17A0A0B4J275 112 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 DUXAA6NLW8 204 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 TP53I11O14683 189 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 TSPAN2O60636 221 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 SP1P08047 785 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 CCL3P10147 92 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 CYP4B1P13584 511 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 ANXA11P50995 505 aaKnown RBP12.78□□□□□ -0.36
TPM3-211ENST00000368531 MTPNP58546 118 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 ART3Q13508 389 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 SELPLGQ14242 412 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 ZNF169Q14929 603 aaPredicted RBP12.78□□□□□ -0.36
TPM3-211ENST00000368531 NTRK2Q16620 822 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 TRMT5Q32P41 509 aaKnown RBP12.78□□□□□ -0.36
TPM3-211ENST00000368531 RUNDC3AQ59EK9 446 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 DCST2Q5T1A1 773 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 ATAD3BQ5T9A4 648 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 SLC22A10Q63ZE4 541 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 SLC6A19Q695T7 634 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 BICRALQ6AI39 1079 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 SLC25A25Q6KCM7 469 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 Q6ZS92 163 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 NUP54Q7Z3B4 507 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 ZAR1Q86SH2 424 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 HPS6Q86YV9 775 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 PSD4Q8NDX1 1056 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 OR52N2Q8NGI0 321 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 DNAJB8Q8NHS0 232 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 MIPOL1Q8TD10 442 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 DIO2Q92813 273 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 LRRC58Q96CX6 371 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 NODALQ96S42 347 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 CPPED1Q9BRF8 314 aaPredicted RBP12.78□□□□□ -0.36
TPM3-211ENST00000368531 THUMPD3Q9BV44 507 aaKnown RBP12.78□□□□□ -0.36
TPM3-211ENST00000368531 IKZF5Q9H5V7 419 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 TRIM45Q9H8W5 580 aaPredicted RBP12.78□□□□□ -0.36
TPM3-211ENST00000368531 EFCAB1Q9HAE3 211 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 TIMMDC1Q9NPL8 285 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 EXD2Q9NVH0 621 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 GID8Q9NWU2 228 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 GIN1Q9NXP7 522 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 FLRT3Q9NZU0 649 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 MRTO4Q9UKD2 239 aaKnown RBP12.78□□□□□ -0.36
TPM3-211ENST00000368531 B3GNT3Q9Y2A9 372 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 PCDHGB3Q9Y5G1 929 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 MGAQ8IWI9 3026 aa12.78□□□□□ -0.36
TPM3-211ENST00000368531 CFAP47Q6ZTR5 3102 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms